Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2079 ATGCCTTCTTCTTCTTCTTTTTCAGTCACTGTCCTCTCAAAATGCAGCGTTGTGCCTGAGCAGAAGTCTAGTGTTGGAGACCTGAATCTCTCAATCTCCGACCTTAACATGCTCTTATCTCACTACATCCAAAAGGGCTGTCTCTTCACCACTCCTTCTCCTTCACACACTCTCATCCCTCATCTCACCAACGCGCTTTCTCAGACGCTCTCTCTCTTCCCTCCCCTCGCTGGCCGTTTCAAAACCGACGCTCACGGCTACGTGTACATCGCATGCAACGACGCTGGCGTCGACTTCATCCACGCCACCGCGGTTGATATCTCCGTCGCCGACCTCCTTTCCCCGTTGTCTGATGTCCCTTCAATCTTCAAGCAACTCTTCCCCTTCCACCACAAAATCAGTTACACCGCTCATTCCTCCCCTATCACCGCCCTACAGGTCACCCAGCTCGCCGATGGCGTCTTCCTCGGCTGCGCCCTCTGCCACGCCGTCACCGACGGCGCCTCCTTCTGGAACTTCTTCAACACCTTCGCCGGAATCTCCAGGGGAGCAGTCATCTCTCCCTCCAGGCTCCCGGATTTCCGCCGTGAATCCATCCTCAACTCCAAGGTCGTCCTCCGCCTTCCGGAAGAAATTAAAGTCACCTTTAATGTCGACGAGCCTTTTCGCGAGAGAATCTTCAGCTTCAGCCGCGAAGCGATTCAGATGCTGAAAGCCACGGTGAACAGTGGCCGGAAGTCGTTTAACGGTGACGCGGTTGAGTTGATGGCGAAGATTAGCAGTGACACGCAACTCATGAAAACGGTTACGCGAGGCGTAACTGACGAAACGACGGTGGAGATTTCGTCGTTTCAGTCTCTGTGCGCGTTGGTATGGCGCTGCGTGACGAGAGCGCGGAAACTCGAGGGGTCGAAAGCGACGACGTTTCGCATGGCAGTGAATGTTCGCCAACGCATGGAGCCCAAGTTGGGAGACTGTTACTTTGGGAACGCAATTCAAAGCATTGCCACGTTTGCAGAAGCGGGTGACGTGGCGTCTAATGAGCTTCGGTGGTGCGCGGAGCTGCTGAACAAAAGCGTGAAGGCGTTCGATAGTGCTACGGTGCGCCGTAACGTGGAGAACTGGGAGCGCGAGCCGAAGTGCTTCGAGCTGGGGAACCACGACGGCGCCACCGTGCAGATGGGAAGCTCGCCGAGGTTTCCGATGTACGACAATGATTTTGGATGGGGAAGGCCCTTGGCCGTGCGCAGCGGCGGAGCAAACAAGTTTGACGGCAAGATGTCGGCGTTTCCTGGGAGGAATGGTGGCGGCGCCGTCGACTTGGAGATGGTTTTGGCGCCGGACACAATGACGCGCCTCGAGTCTGATTCTGAGTTCATGTTTTACGTGTCTGGTTAG 1398 0.5579 MPSSSSFSVTVLSKCSVVPEQKSSVGDLNLSISDLNMLLSHYIQKGCLFTTPSPSHTLIPHLTNALSQTLSLFPPLAGRFKTDAHGYVYIACNDAGVDFIHATAVDISVADLLSPLSDVPSIFKQLFPFHHKISYTAHSSPITALQVTQLADGVFLGCALCHAVTDGASFWNFFNTFAGISRGAVISPSRLPDFRRESILNSKVVLRLPEEIKVTFNVDEPFRERIFSFSREAIQMLKATVNSGRKSFNGDAVELMAKISSDTQLMKTVTRGVTDETTVEISSFQSLCALVWRCVTRARKLEGSKATTFRMAVNVRQRMEPKLGDCYFGNAIQSIATFAEAGDVASNELRWCAELLNKSVKAFDSATVRRNVENWEREPKCFELGNHDGATVQMGSSPRFPMYDNDFGWGRPLAVRSGGANKFDGKMSAFPGRNGGGAVDLEMVLAPDTMTRLESDSEFMFYVSG 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2079 465 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 7 464 - -
Aed7g2079 465 Pfam Transferase family 8 460 - -
Aed7g2079 465 SUPERFAMILY CoA-dependent acyltransferases 28 188 - -
Aed7g2079 465 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 7 464 - -
Aed7g2079 465 Gene3D - 212 455 IPR023213 -
Aed7g2079 465 Gene3D - 9 211 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2079 Aed-Chr7 23480899 23483039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2079 29 463 Monolignol Biosynthesis Gene Families AT5G48930 27.840 9.65e-41 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2079 - - gmx:100792476 775.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g2079 7 23480899 23483039 Aed3g2136 3 25145348 25146817 PCT