Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed7g2074 | ATGGCGGCGAGCGATCGCACAGTGTTGCAGTTCTCCTCTTCTTCATCTTCATCTTCTTCGCAAAGCTTATTGGCGAGGGTCCATCCTCTGGTCATCTTCAACATCTGTGATTGCTACGTTCGGCGCCCTGACCAAGCCGACCGCGTTATCGGAACCCTACTCGGCTCCGTCCTTCCCGATGGAACCATCGATATCCGCAATTCCTACGCTGTTCCTCACAACGAGTCCATCGAACAGGTTGCGTTGGATATAGAGTACCACAACAATATGTTAATATCCCACCAAAAAGTGAATCCAAAAGAAATCATAGTAGGATGGTATTCAACTGGTCTTGGAGTAACTGGTGGTAGTGCATTAATCCATGAGTTTTATTCTCGAGAAGTACCCAATCCCATACACTTGACTGTTGATACAGGATTTGCAAATGGAGGTGGTACTATTAAAGCTTACGTGTCTAACAATTTATCTCTTGGAGAACGGCAAATTGCTGCACAGTTTCAAGAAATCCCATTAGATCTTCGTTTGGTTGAAGCTGAGCGAATTGGATTTGATATGCTGAAGGCAACTGCAGTTGACAAAATTCCCTCAGATTTAGAAGGGATGGAAGCATCAATGCAACATCTGCTAGTCTTGATTGATGACATCTACAAATATGTTGACGATGTTGTGGAAGGGCGAGTTGAACCAGACAACAAAATTGGGAGATTAATATCAGATGCTGTAGGTTCCCTTCCCAAAGTGTCCCCATCAGTTTTTGATAAGCTTGTGAATGACAGTTTGCAGGATCAGTTGCTTTTGCTGTATTTGTCTAGTATCACAAGAACGCAGCTTGGCTTGGCTGAAAAATTGAACACCGCTGCTCAGATTCTGTGA | 873 | 0.4399 | MAASDRTVLQFSSSSSSSSSQSLLARVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTIDIRNSYAVPHNESIEQVALDIEYHNNMLISHQKVNPKEIIVGWYSTGLGVTGGSALIHEFYSREVPNPIHLTVDTGFANGGGTIKAYVSNNLSLGERQIAAQFQEIPLDLRLVEAERIGFDMLKATAVDKIPSDLEGMEASMQHLLVLIDDIYKYVDDVVEGRVEPDNKIGRLISDAVGSLPKVSPSVFDKLVNDSLQDQLLLLYLSSITRTQLGLAEKLNTAAQIL | 290 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed7g2074 | 290 | Pfam | JAB1/Mov34/MPN/PAD-1 ubiquitin protease | 26 | 128 | IPR000555 | GO:0005515|GO:0008233|GO:0008237 | |
Aed7g2074 | 290 | Gene3D | Cytidine Deaminase, domain 2 | 11 | 191 | - | - | |
Aed7g2074 | 290 | SMART | pad1_6 | 24 | 155 | IPR000555 | GO:0005515|GO:0008233|GO:0008237 | |
Aed7g2074 | 290 | Hamap | Eukaryotic translation initiation factor 3 subunit F [EIF3F]. | 23 | 286 | IPR027531 | GO:0003743|GO:0005852|GO:0006413|GO:0031369 | |
Aed7g2074 | 290 | ProSiteProfiles | MPN domain profile. | 25 | 156 | IPR037518 | - | |
Aed7g2074 | 290 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F | 8 | 289 | IPR027531 | GO:0003743|GO:0005852|GO:0006413|GO:0031369 | |
Aed7g2074 | 290 | Pfam | Maintenance of mitochondrial structure and function | 177 | 283 | IPR024969 | - | |
Aed7g2074 | 290 | CDD | MPN_eIF3f | 26 | 283 | IPR027531 | GO:0003743|GO:0005852|GO:0006413|GO:0031369 | |
Aed7g2074 | 290 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED | 8 | 289 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed7g2074 | Aed-Chr7 | 23432087 | 23435389 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed7g2074 | 2 | 290 | Eukaryotic Initiation Factors Gene Family | AT2G39990 | 74.914 | 2.76e-156 | 436 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed7g2074 | K03249 | - | gmx:100811797 | 506.138 |