Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2074 ATGGCGGCGAGCGATCGCACAGTGTTGCAGTTCTCCTCTTCTTCATCTTCATCTTCTTCGCAAAGCTTATTGGCGAGGGTCCATCCTCTGGTCATCTTCAACATCTGTGATTGCTACGTTCGGCGCCCTGACCAAGCCGACCGCGTTATCGGAACCCTACTCGGCTCCGTCCTTCCCGATGGAACCATCGATATCCGCAATTCCTACGCTGTTCCTCACAACGAGTCCATCGAACAGGTTGCGTTGGATATAGAGTACCACAACAATATGTTAATATCCCACCAAAAAGTGAATCCAAAAGAAATCATAGTAGGATGGTATTCAACTGGTCTTGGAGTAACTGGTGGTAGTGCATTAATCCATGAGTTTTATTCTCGAGAAGTACCCAATCCCATACACTTGACTGTTGATACAGGATTTGCAAATGGAGGTGGTACTATTAAAGCTTACGTGTCTAACAATTTATCTCTTGGAGAACGGCAAATTGCTGCACAGTTTCAAGAAATCCCATTAGATCTTCGTTTGGTTGAAGCTGAGCGAATTGGATTTGATATGCTGAAGGCAACTGCAGTTGACAAAATTCCCTCAGATTTAGAAGGGATGGAAGCATCAATGCAACATCTGCTAGTCTTGATTGATGACATCTACAAATATGTTGACGATGTTGTGGAAGGGCGAGTTGAACCAGACAACAAAATTGGGAGATTAATATCAGATGCTGTAGGTTCCCTTCCCAAAGTGTCCCCATCAGTTTTTGATAAGCTTGTGAATGACAGTTTGCAGGATCAGTTGCTTTTGCTGTATTTGTCTAGTATCACAAGAACGCAGCTTGGCTTGGCTGAAAAATTGAACACCGCTGCTCAGATTCTGTGA 873 0.4399 MAASDRTVLQFSSSSSSSSSQSLLARVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTIDIRNSYAVPHNESIEQVALDIEYHNNMLISHQKVNPKEIIVGWYSTGLGVTGGSALIHEFYSREVPNPIHLTVDTGFANGGGTIKAYVSNNLSLGERQIAAQFQEIPLDLRLVEAERIGFDMLKATAVDKIPSDLEGMEASMQHLLVLIDDIYKYVDDVVEGRVEPDNKIGRLISDAVGSLPKVSPSVFDKLVNDSLQDQLLLLYLSSITRTQLGLAEKLNTAAQIL 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2074 290 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 26 128 IPR000555 GO:0005515|GO:0008233|GO:0008237
Aed7g2074 290 Gene3D Cytidine Deaminase, domain 2 11 191 - -
Aed7g2074 290 SMART pad1_6 24 155 IPR000555 GO:0005515|GO:0008233|GO:0008237
Aed7g2074 290 Hamap Eukaryotic translation initiation factor 3 subunit F [EIF3F]. 23 286 IPR027531 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Aed7g2074 290 ProSiteProfiles MPN domain profile. 25 156 IPR037518 -
Aed7g2074 290 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F 8 289 IPR027531 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Aed7g2074 290 Pfam Maintenance of mitochondrial structure and function 177 283 IPR024969 -
Aed7g2074 290 CDD MPN_eIF3f 26 283 IPR027531 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Aed7g2074 290 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED 8 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2074 Aed-Chr7 23432087 23435389 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2074 2 290 Eukaryotic Initiation Factors Gene Family AT2G39990 74.914 2.76e-156 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2074 K03249 - gmx:100811797 506.138