Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2061 ATGCTCACACACTCACTCCATCACAAAACTCTCCCCACACTCAAAACAAACAAACACATACATTTATATATATACACATCATTTTCCCACTTTGTCCACCCAAAAACAGCACCTCACTACTATTTTCCAAACTCCATCATGGCCACTGCCACCGCTGCCGCCACGTCATACTTCTTCGGCATCCGTCTCAACAGCCCGACAACCTTAAACAACGGAAGATTCCACGCGCTCTTGAACTTCGGCAAAAAGAAGGCGGCACCGCCTCCGCCAAAGAAAAAGGAAGTGAAAGTGAGACCATCCGGCGACCGGCTGGTGTGGTTTCCGAATGCGGAGTCGCCGGAGTGGCTCGACGGAAGCTTGATCGGCGACCGCGGGTTCGACCCGTTAGGCTTCGCGAAACCCGCTGAGTACTTGCAGTTCGACCTGGACTCGCTGGACCAGAACCTCGCGAAGAACGTCGCCGGCGATGTGATCGGAACCAGGGTGGAGGTTGCGGAGGTGAAAGCGACGCCGTTTCAGCCCTACACGGAGGTTTTCGGAATTCAGAGGTTCCGCGAGTGCGAAGTCATTCACGGAAGGTGGGCAATGCTGGGTTCTCTCGGTGCTTTGGCCGTTGAGGTCCTCACCGGAGTCTCATGGCAAGACGCCGGAAAGGTAGAGCTGGTAGAAGGATCATCTTACTTGGGACTTCCTCTTCCTTTTTCATTGACCACATTGATATGGATTGAGGTGATAGTGATAGGGTACATAGAGTTTCAAAGAAATGCAGAACTTGACCCAGAGAAAAGATTGTACCCAGGTGGCAGATTCTTCGATCCTCTTGGTTTGGCCAGTGACCCTGAAGAAAAAGCCAGACTTCAACTTGCAGAGATCAAACATTCTCGCTTAGCCATGGTGGTCTTCCTCATCTTTGCAGTTCAAGCTGCTGTAACAGGAAAAGGCCCTATCAGTTTCATTGCCACCTTCAACAACTGA 975 0.5128 MLTHSLHHKTLPTLKTNKHIHLYIYTSFSHFVHPKTAPHYYFPNSIMATATAAATSYFFGIRLNSPTTLNNGRFHALLNFGKKKAAPPPPKKKEVKVRPSGDRLVWFPNAESPEWLDGSLIGDRGFDPLGFAKPAEYLQFDLDSLDQNLAKNVAGDVIGTRVEVAEVKATPFQPYTEVFGIQRFRECEVIHGRWAMLGSLGALAVEVLTGVSWQDAGKVELVEGSSYLGLPLPFSLTTLIWIEVIVIGYIEFQRNAELDPEKRLYPGGRFFDPLGLASDPEEKARLQLAEIKHSRLAMVVFLIFAVQAAVTGKGPISFIATFNN 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2061 324 Pfam Chlorophyll A-B binding protein 113 308 IPR022796 -
Aed7g2061 324 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP29.3, CHLOROPLASTIC 47 323 - -
Aed7g2061 324 Gene3D Chlorophyll a/b binding protein domain 105 324 - -
Aed7g2061 324 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 47 323 IPR001344 GO:0009765|GO:0016020
Aed7g2061 324 SUPERFAMILY Chlorophyll a-b binding protein 98 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2061 Aed-Chr7 23321685 23325212 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2061 59 321 Chloroplast and Mitochondria Gene Families AT3G08940 71.863 3.08e-136 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2061 K08915 - gmx:100820335 507.294