Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2052 ATGGCATCCAGAGGAACCGGAACGCTGATTTTGGTGTGTCTCTTATGGCTTTTCTTCCTCTGCGCCACCATTGCTTTCTTTCAGCTCCACTTGGTAGACAACCGAACCAGCCACTCTGAATCTCACACTAACTCCATCGCAACTCAACATGATCGCCCAGATACCCTTTTGGAACTGGATTTGGAGGGTGTCACCCACAAGGTATATTTTGATATACAGATCCATGAGAAATTAGCGGGTCGCATAGTGATCGGCCTTTTTGGGAACACAGTACCAAAAACTGCAGGAGAGAAAGGAGTGGGAGGAAGTGGGAAGTCTCTTCATTATAAAGGGAGCACATTCCATAGGATTATACCAAGCTTTATGGTCCAGGGGGGTGATTTCACCCGTGGTGATGGAAGAGGTGGAGAATCAATCTATGGTGATAAGTTTGCTGATGAAAACTTTAAGCTGAAGCATACCGGGCCAGGATACTTATCCATGGCAAATTCTGGGGAAGACACCAATGGCTCTCAGTTCTTCATAACAACAGTTAAAACCAGCTGGCTGGATGGACGCCATGTTGTGTTTGGCAAGGTACTTTCTGGTATGGACGTTTTGTACAAGATTGAAGCAGAAGGAAGTGAAAGTGGCTCGCCAAAAAACAAGGTTGTCATATCAGATAGTGGGGAATTAACTTCATGA 684 0.4547 MASRGTGTLILVCLLWLFFLCATIAFFQLHLVDNRTSHSESHTNSIATQHDRPDTLLELDLEGVTHKVYFDIQIHEKLAGRIVIGLFGNTVPKTAGEKGVGGSGKSLHYKGSTFHRIIPSFMVQGGDFTRGDGRGGESIYGDKFADENFKLKHTGPGYLSMANSGEDTNGSQFFITTVKTSWLDGRHVVFGKVLSGMDVLYKIEAEGSESGSPKNKVVISDSGELTS 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2052 227 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP21-2 36 225 - -
Aed7g2052 227 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 70 221 IPR002130 GO:0000413|GO:0003755
Aed7g2052 227 Gene3D - 57 227 IPR029000 -
Aed7g2052 227 MobiDBLite consensus disorder prediction 208 227 - -
Aed7g2052 227 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 109 126 IPR020892 GO:0003755|GO:0006457
Aed7g2052 227 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 69 224 IPR002130 GO:0000413|GO:0003755
Aed7g2052 227 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 36 225 - -
Aed7g2052 227 MobiDBLite consensus disorder prediction 213 227 - -
Aed7g2052 227 SUPERFAMILY Cyclophilin-like 64 225 IPR029000 -
Aed7g2052 227 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 86 101 IPR002130 GO:0000413|GO:0003755
Aed7g2052 227 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 157 172 IPR002130 GO:0000413|GO:0003755
Aed7g2052 227 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 114 126 IPR002130 GO:0000413|GO:0003755
Aed7g2052 227 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 185 200 IPR002130 GO:0000413|GO:0003755
Aed7g2052 227 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 172 184 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2052 Aed-Chr7 23258332 23263104 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2052 70 219 U-box Gene Family AT5G67530 41.447 1.07e-23 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2052 K01802 - gmx:100792649 401.749