Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2047 ATGACATCACCGTGGAATAAGATTCACATTCACCACTCCCAACCTTCTCCGCCACTTCCAGCGCCACCACCACTTTCCGACTCCGATTCCGATGGAGGCGGCGATTCCTCCGGCGCCGCCCCACTCCGCCACTCGGACCTCTCAAACTCCATCTTCAAGCCCTACCTCGAACTCTCCGGGCACTCCGGCGCGGACCTCTCGAAGATCCAATCGTTCCTGACGTCATCCTCCGCCGGCGCCCTATCGTGCCTGATCTGCCTGGAACGCATAAAGCCATCCGACCCGACCTGGTCCTGCTCCTCCCTCTGCTACGCCGTCTTCCACCTCATCTGCATCCAGAGTTGGGCCCGCCAGTCCTCCGACCTCGCCGCCGCGCGCGCCGCCACACGTCTCCCCATCACCCCCACCACCGCCTCCGACACCGCCCTCTGGAACTGCCCTAAATGCAGATCCGAGTACCCCAAATCACACATTCCCAAAACTTACCTCTGCTTCTGCGGCAAGCTTGATAACCCTCCCAATGATCCCTGGATTTTGCCTCACTCTTGCGGCGAAGTTTGTGGAAGACCGTTGAAGCACAATTGCGGCCACCACTGTTTGCTACTCTGCCATCCCGGGCCGTGCCCCTCTTGCCCCAAACTCGTTAAAGTTCGATGCTTTTGTGGCTGCCTTGAAGATGTTCGACGATGTGGCTTCAAGGAATTCTCATGTAATAAACCTTGTTCCAAGGTTTTGGATTGCGGGGTTCACCGCTGCACTGAGGTTTGCCACCCTGGCAGTTGCCCTCCTTGCCGGACACGTGGCGTGTATTCGTGCCGGTGTGGGAAGGTCAAGGAGGAGAAGGAGTGTTGTGATCGTGTTTTTCAATGTGGGAATCCGTGTGAGAAGAGTCTTAGCTGTGGGAAGCATGTTTGTGAGAGAGGGTGTCATTCTGGTGAGTGCGGTGAGTGTCCCCTTAAGGGGAGGAGAACGTGTCCTTGTGGGAAAAGGGTTTATGAAGGAATGCCTTGTGATGCTCCTGTGCAGCTTTGTGGCTCTACCTGTGATAAGATGCTGCCCTGTGGCTACCACAGGTGCCCCGAGCGGTGCCACCGGGGACAGTGCGTTGAGACTTGCAGGGTTGTTGTGAAGAAGTCATGCCGATGTGGGAGCCTCAAGAAAGATATTTGGCATGCGAAAGGAAGTGTCAGAGGATGCGTGACTGCAGTCGGCATGCTTGCAAGCGTCGCTGCTGCGATGGGGATTGCCCTCCCTGCTCGGAGATATGCAGCAGGAGGCTTCGATGTAAGAACCATAAATGCCCTTCTCCATGTCATAGGTCCTTGTGCTCCTTGCCCAATAATGGTGACAATTTCATGTGCATGTGGAGAGACACATTTTGAGCCACATAAATGCCATTATGGAGCCTGCCATCCTTGTCGACTACCTTGTGCTGAGGAGTACCAATGTGGCCATACATGCAATTTAAGGTGTCATGGTGCTAAGCCTCCTCCTAATCCAGAGTTTACTCTTAAACCAAAGAAAAAGAAGATTATACAACAAAATGAAGGTGTTCCTAGCACTCCATGCCCTCCTTGCCCAGAACTTGTGTGGAGATCATGTGTTGGGCAACACATTGGAGCTGAGAGAATGATGGTCTGCTCTGACAAATCACAGTTCTCCTGTGAAAATTTATGTGGTAATCCTCTACCATGTGGTAATCATTATTGTACAAAAACCTGCCATGCCTTTGAGAACCGGTTACAAGGAAGTGAACCTTGTGAAGATTGTTATCTTCATTGCCAAAAGGAAAGAGAGCCTGCATGTCCACATCACTGCCCTCGGTCATGCCATCCTGGAGACTGTCCTCCGTGCAAGGTGCTCATTAAACGGTCATGTCACTGTGGCGCAATGGTCCATGTGTTTGAGTGCATATATTACAACAGTTTGTCTTCAAAGAGTCAAGAGACTGTTCGTTCATGTGGTGGGCCATGTCACAGAAAGTTGCCAAATTGTACACATCTATGTCCCGAGACATGTCATCCTGGTCAATGCCCAAATGCTGCAAAATGCTGTAAAAAGGTCACTGTTCGGTGCAAATGCCAAACTTTGAAAAAGGAGTGGGTTTGTCAAGATGTTCAAGCAGCATATCATCTTGTTGGTAGCCATCCAAGGGATACACCAAAAAATCAATTTGGTATTGGACTTATTCCATGCAATTCTGATTGCAAGAGTAAAGTGCAGGTTGTTGAGTCAGAACTTCAATTACGCAAATCTAGAGTTACAGAGGTACAAGAGCCAGATACAGAAAAATCAGCTCGAAAGCGACGAAAAAAACGGGAAAGAGTTCTAGAATCTAAGGAAACAACAAAGCTACAGAAAATTATTTCCAGAATGAAGCGGTTTCTTCTATTTGTCTTTATTTTGGTCATACTTCTTGCGGCTACATATTATGGATACAAGGGACTTTTATGGCTCTCTGATTGGATGAATGAAGTTGAAGAAAGAAGGCAAAGATATTCTCGAACCAAATGA 2514 0.4968 MTSPWNKIHIHHSQPSPPLPAPPPLSDSDSDGGGDSSGAAPLRHSDLSNSIFKPYLELSGHSGADLSKIQSFLTSSSAGALSCLICLERIKPSDPTWSCSSLCYAVFHLICIQSWARQSSDLAAARAATRLPITPTTASDTALWNCPKCRSEYPKSHIPKTYLCFCGKLDNPPNDPWILPHSCGEVCGRPLKHNCGHHCLLLCHPGPCPSCPKLVKVRCFCGCLEDVRRCGFKEFSCNKPCSKVLDCGVHRCTEVCHPGSCPPCRTRGVYSCRCGKVKEEKECCDRVFQCGNPCEKSLSCGKHVCERGCHSGECGECPLKGRRTCPCGKRVYEGMPCDAPVQLCGSTCDKMLPCGYHRCPERCHRGQCVETCRVVVKKSCRCGSLKKDIWHAKGSVRGCVTAVGMLASVAAAMGIALPARRYAAGGFDVRTINALLHVIGPCAPCPIMVTISCACGETHFEPHKCHYGACHPCRLPCAEEYQCGHTCNLRCHGAKPPPNPEFTLKPKKKKIIQQNEGVPSTPCPPCPELVWRSCVGQHIGAERMMVCSDKSQFSCENLCGNPLPCGNHYCTKTCHAFENRLQGSEPCEDCYLHCQKEREPACPHHCPRSCHPGDCPPCKVLIKRSCHCGAMVHVFECIYYNSLSSKSQETVRSCGGPCHRKLPNCTHLCPETCHPGQCPNAAKCCKKVTVRCKCQTLKKEWVCQDVQAAYHLVGSHPRDTPKNQFGIGLIPCNSDCKSKVQVVESELQLRKSRVTEVQEPDTEKSARKRRKKRERVLESKETTKLQKIISRMKRFLLFVFILVILLAATYYGYKGLLWLSDWMNEVEERRQRYSRTK 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2047 837 CDD NF-X1-zinc-finger 183 231 - -
Aed7g2047 837 MobiDBLite consensus disorder prediction 755 775 - -
Aed7g2047 837 Pfam NF-X1 type zinc finger 354 373 IPR000967 GO:0005634|GO:0008270
Aed7g2047 837 Pfam NF-X1 type zinc finger 604 619 IPR000967 GO:0005634|GO:0008270
Aed7g2047 837 Pfam NF-X1 type zinc finger 247 265 IPR000967 GO:0005634|GO:0008270
Aed7g2047 837 Pfam NF-X1 type zinc finger 483 492 IPR000967 GO:0005634|GO:0008270
Aed7g2047 837 Pfam NF-X1 type zinc finger 195 212 IPR000967 GO:0005634|GO:0008270
Aed7g2047 837 Pfam NF-X1 type zinc finger 565 575 IPR000967 GO:0005634|GO:0008270
Aed7g2047 837 Pfam NF-X1 type zinc finger 300 318 IPR000967 GO:0005634|GO:0008270
Aed7g2047 837 SUPERFAMILY RING/U-box 77 155 - -
Aed7g2047 837 PANTHER NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1 26 389 IPR034078 GO:0003700
Aed7g2047 837 SMART znfxneu3 455 475 IPR000967 GO:0005634|GO:0008270
Aed7g2047 837 SMART znfxneu3 195 213 IPR000967 GO:0005634|GO:0008270
Aed7g2047 837 SMART znfxneu3 483 528 IPR000967 GO:0005634|GO:0008270
Aed7g2047 837 SMART znfxneu3 300 319 IPR000967 GO:0005634|GO:0008270
Aed7g2047 837 SMART znfxneu3 247 266 IPR000967 GO:0005634|GO:0008270
Aed7g2047 837 SMART znfxneu3 665 687 IPR000967 GO:0005634|GO:0008270
Aed7g2047 837 SMART znfxneu3 354 374 IPR000967 GO:0005634|GO:0008270
Aed7g2047 837 SMART znfxneu3 602 620 IPR000967 GO:0005634|GO:0008270
Aed7g2047 837 SMART znfxneu3 565 592 IPR000967 GO:0005634|GO:0008270
Aed7g2047 837 CDD NF-X1-zinc-finger 290 337 - -
Aed7g2047 837 MobiDBLite consensus disorder prediction 1 45 - -
Aed7g2047 837 CDD NF-X1-zinc-finger 237 285 - -
Aed7g2047 837 PANTHER NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1 440 834 IPR034078 GO:0003700
Aed7g2047 837 PANTHER NF-X1-TYPE ZINC FINGER PROTEIN NFXL1 440 834 - -
Aed7g2047 837 PANTHER NF-X1-TYPE ZINC FINGER PROTEIN NFXL1 26 389 - -
Aed7g2047 837 CDD NF-X1-zinc-finger 344 389 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-X1 Aed7g2047 zf-NF-X1 0.0033 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2047 K15683 - zju:107413863 1201.81