Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2035 ATGTCGAACCCAGATACTCGATCATTCAGTTGGCACTACACGGAACTCGATGACAGAGACCTCGAGATCCGAGGCAGGACTCTGTTTTTTGTCATCGTACTATTCTCCATTATTCTCCTCGTCACTGTTCTTTTCATCTACACGCGCTGGGTTTGCCGCTACCAGGGGCGCCTCCCCACAACGGCGTTCTCCGCCGCAGCAGTTCACGCTCCGCCGCTAGCGACGCCTCAGGGACTGGACCCCGCCAGCATCAAGAAACTGCCCATAATCCTCCACCACGCGGCGTCGGACCGCGACGAAAGCGCGTGGGACGACACGGAGTGCTGTATCTGCCTGGGGGAGTTCAGAGACGGCGAGAAAGTGAAAGTATTGCCGGCGTGTGATCACTATTTCCACTGTGATTGTGTCGATAAGTGGCTGATTCACCACTCTAGTTGCCCTCTCTGCAGAGCTTCTCTCAAGGTTGAAACTTCCTTCCCTAAGATTTTCATTCAGGAACCACCTCTTAGAATTGACTTCCAGTTCTAG 528 0.5379 MSNPDTRSFSWHYTELDDRDLEIRGRTLFFVIVLFSIILLVTVLFIYTRWVCRYQGRLPTTAFSAAAVHAPPLATPQGLDPASIKKLPIILHHAASDRDESAWDDTECCICLGEFRDGEKVKVLPACDHYFHCDCVDKWLIHHSSCPLCRASLKVETSFPKIFIQEPPLRIDFQF 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2035 175 PANTHER RING-H2 FINGER PROTEIN ATL66 2 165 - -
Aed7g2035 175 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 2 165 IPR044675 -
Aed7g2035 175 Pfam Ring finger domain 107 150 IPR001841 -
Aed7g2035 175 ProSiteProfiles Zinc finger RING-type profile. 108 150 IPR001841 -
Aed7g2035 175 SMART ring_2 108 149 IPR001841 -
Aed7g2035 175 CDD RING-H2_PA-TM-RING 107 150 - -
Aed7g2035 175 SUPERFAMILY RING/U-box 98 159 - -
Aed7g2035 175 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 69 156 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2035 Aed-Chr7 23128078 23128605 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2035 11 158 C3H Transcription Factor Family AT3G11110 42.667 1.78e-35 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2035 - - gmx:100803278 359.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g2035 7 23128078 23128605 Aed3g2175 3 25415498 25416385 PCT