Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2034 ATGAAGGGTTATGAGCCCCGTTCAAGCTCTTCATGTGCGGCTTGCAAGTTATTGAAGAGAAGATGCATACCAAATTGTATATTTGCACCATACTTTAGGTCTGATGAGTGCAAGAAGTTTGCAAAGGTGCACAAGGTATTTGGAGCTAGCAATGTGAGTAAGATCCTTGTTGAAGTGCCAGAAGAGCAGAGAGAGGACACGGTGAATTCTCTGGCTTATGAGGCTGAGGCGAGGCTGAGAGACCCTGTTTATGGATGCATTGGTGCCATTGCTCTGAACGAGAGACACAGCATTCCATTGAGCAGAAAGAAAGCAACACTAGCAGTTTTGATTCTTGCTTATCTTTGA 348 0.4454 MKGYEPRSSSSCAACKLLKRRCIPNCIFAPYFRSDECKKFAKVHKVFGASNVSKILVEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALNERHSIPLSRKKATLAVLILAYL 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2034 115 PANTHER LOB DOMAIN-CONTAINING PROTEIN 21 1 101 - -
Aed7g2034 115 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Aed7g2034 115 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 101 - -
Aed7g2034 115 Pfam Lateral organ boundaries (LOB) domain 11 96 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2034 Aed-Chr7 23111623 23112879 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2034 1 114 AS2 family AT3G11090 70.175 1.04e-54 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aed7g2034 LOB 2.4e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2034 - - gmx:100791250 193.741