Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2028 ATGAGCAAAAACTGGAAATCTAGCTGCTTCAGGGATCCTCAGAGAGTCCTGTTCCTTCTAGTGTTGTGTTTGTTGTTTCAGAACTTTAGTTTATGCTGCTCTTTGAACGAAGAAGGTAAAGCTCTTTTGAAGTTCAAGCAGGGAATAGTAAACGACCCTTTTGGTGCTTTGTCCAATTGGGTTGACGATGAAGTAGCAGTTGGCCCCTGTAATTGGTTTGGAATTGAGTGTTCTGATGGAAGAGTACTGGTCTTGAATTTGAAAGACCTTTGTCTCGAAGGAAATCTGGCACCTGAGCTTGCAAGCCTTGATAACATAAAGTCAATAATTTTGCGGAACAATTCTTTTTATGGAATCATCCCCCAAGGAATTTCACACTTGAATGAATTAGAGGTTTTGGATTTGGGCTACAACAACTTTAGTGGACCGCTACCTACAGATCTTGGGAATAATATTTCGCTGACTATCCTTTTGTTGGACAACAATGATCATCTTTGTGGTTTCTCTCATGAAATTAATGAATTGAAGATGGTTTCTGAATATCAAGTAGATGAAAACCAACTAAGTAGAGCAGAAAAAGTGCCAGATAGTACAATAAGATCCATCAAACGGCATGTTGCCCAATATAAAAATGGTGTTCGGAGGCTGCTGCAAGAGCCAATTCGTGATAGAGAAGGTGGAAGTCCTTTTAATCGTGCAGCTAATTTTCCTGATAGTCCTGCTCCATCTCCTTCTGCTCCGTCTCCTACAGCTCCCTCACCTGCTCCTGCTCCATCTCCTTCAGCTCCCATTGACCGAAATGATTCTGCTTTGGCTTCTCCTTCTCCCTTGCCTGAAACACGCTCTGCATCGCCATCTACAAGTAGCTCATCAAAGAGCCATCTAGTTATTATTTTGGCCGGAGTTATAGGTGGTGCTGTATTTCTTCTCATTTCAATCATTGGCCTATATCTCTGCAAGACAAACAAGGTAGCTGCTGTAAAACCTTGGGCCACAGGATTAAGTGGACAGCTTCAGAAGGCATTCGTAACAGGTGTGCCAAAGCTAAAGAGATCAGAGCTTGAAGCAGCATGTGAGGATTTTAGTAATGTAATTGGCACTTCATCCATTGGTACAGTGTACAAAGGAACTTTATCTAGTGGTGTTGAAATCGCTGTGGCATCTGTTGCAGTGACATCATCCAAAGATTGGTCGAAAACTTCAGAAGCCCAATTTAGGAACAAGATAGATACATTATCAAAAGTGAACCACAAGAATTTTGTAAATCTTCTTGGACATTGTGAAGAAGATGAGCCTTTCACCAGAATGGTGGTTTTTGAGTATGCCCCAAATGGAACACTCTTTGAGCATTTACACATAAAAGAATCTGAGCACTTGGATTGGGGAACAAGACTTAGAGTTGCCATGGGCATGGCTTACTGCCTACAGCATATGCACCAGTTGGAGCCTCCTTTGGCCCTTAGCAACCTGAATTCTTCATCTGTCCAACTCACTGATGATTATGCTGCCAAAATCTCTGATTTGAGTTTCTTTAATGAAATAGCTTCAGCTGTGAAAAAATCTCCTGCTAGAAAACACACTGACATGACACCAGCAAGTAACATTTATAGCTTTGGTGTTATATTATTTGAAATGGTAACTGGTAAACTCCCTTATTCAGTGGAAAATGATGGTTCACTCCATGACTGGGCCTCACACTATTTACAAGGGGATCATGATCAGCCCCTCAAAGAAATGGTGGATCCAACTCTAGCATCCTTCCAAGAAGAACAGCTTGAACAAGTTGCTACTTTGATTAAATCTTGTGTCCATCCTGATCAAAAGCAAAGACCAACAATACAAGAAGTTTGTGTGAGATTAAGAGAGATAACAAAAATAACACCTGATGCAGCTGTTCCAAAGCTTTCTCCACTTTGGTGGGCAGAGCTTGAGATTGCTTCTGTAGATGCAAGCTGA 1956 0.4136 MSKNWKSSCFRDPQRVLFLLVLCLLFQNFSLCCSLNEEGKALLKFKQGIVNDPFGALSNWVDDEVAVGPCNWFGIECSDGRVLVLNLKDLCLEGNLAPELASLDNIKSIILRNNSFYGIIPQGISHLNELEVLDLGYNNFSGPLPTDLGNNISLTILLLDNNDHLCGFSHEINELKMVSEYQVDENQLSRAEKVPDSTIRSIKRHVAQYKNGVRRLLQEPIRDREGGSPFNRAANFPDSPAPSPSAPSPTAPSPAPAPSPSAPIDRNDSALASPSPLPETRSASPSTSSSSKSHLVIILAGVIGGAVFLLISIIGLYLCKTNKVAAVKPWATGLSGQLQKAFVTGVPKLKRSELEAACEDFSNVIGTSSIGTVYKGTLSSGVEIAVASVAVTSSKDWSKTSEAQFRNKIDTLSKVNHKNFVNLLGHCEEDEPFTRMVVFEYAPNGTLFEHLHIKESEHLDWGTRLRVAMGMAYCLQHMHQLEPPLALSNLNSSSVQLTDDYAAKISDLSFFNEIASAVKKSPARKHTDMTPASNIYSFGVILFEMVTGKLPYSVENDGSLHDWASHYLQGDHDQPLKEMVDPTLASFQEEQLEQVATLIKSCVHPDQKQRPTIQEVCVRLREITKITPDAAVPKLSPLWWAELEIASVDAS 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2028 651 Gene3D Transferase(Phosphotransferase) domain 1 442 632 - -
Aed7g2028 651 Pfam Leucine rich repeat N-terminal domain 36 78 IPR013210 -
Aed7g2028 651 SUPERFAMILY L domain-like 35 189 - -
Aed7g2028 651 MobiDBLite consensus disorder prediction 273 289 - -
Aed7g2028 651 SUPERFAMILY Protein kinase-like (PK-like) 342 620 IPR011009 -
Aed7g2028 651 MobiDBLite consensus disorder prediction 214 289 - -
Aed7g2028 651 PANTHER PROTEIN MALE DISCOVERER 2 1 651 - -
Aed7g2028 651 Gene3D Ribonuclease Inhibitor 33 216 IPR032675 -
Aed7g2028 651 PANTHER BNAA09G55080D PROTEIN 1 651 - -
Aed7g2028 651 MobiDBLite consensus disorder prediction 240 261 - -
Aed7g2028 651 Gene3D Phosphorylase Kinase; domain 1 331 441 - -
Aed7g2028 651 ProSiteProfiles Protein kinase domain profile. 359 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g2028 651 Pfam Protein tyrosine and serine/threonine kinase 361 619 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2028 Aed-Chr7 23058583 23062525 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2028 18 622 Receptor kinase-like Gene Family AT5G16000 25.237 3.35e-44 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Aed7g2028 PK_Tyr_Ser-Thr 2.4e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2028 - - gmx:100807163 1068.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g2028 7 23058583 23062525 Aed3g2183 3 25471402 25475308 PCT