Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2025 ATGGCTGGGAATTCTCCATGTGCTTCATGCAAGTTGCTGAGACGCAGGTGTAGCAAAGACTGTATCTTTGCTCCTTATTTCCCTTCCAATGATCCTCAAAAGTTCGCCTTAGTTCACAAGGTTTTTGGTGCTAGCAATGTCAGCAAAATGCTTCAGGAACTTCCAGTTGATAAGAGAGGTGATGCTGTGAGTAGTTTGGTGTATGAAGCACATGCAAGAGTTCGAGACCCTGTGTATGGTTGTGTTGGAGCCATATCCTATCTGCAAAACCAGGTTTCTGAGCTTCAAATGCAGCTTGCAGTGGCTCAAGCAGAGATACTCTGCATCCAGATGCAACAGGAGCCGTTGATGCCAAACCCAGATATGGAACAAGTCCCATCAGATAATCACAAATCTTACCTTCTCCATAATGAACTCCCTCAGTACCTCAACTATAACTATGCCTCTTCTAGCAATGTAATTTATGATTCTCTCTCAAGAGAGAGCATTTTTGGACATGACATGGTTTCTTGA 513 0.4347 MAGNSPCASCKLLRRRCSKDCIFAPYFPSNDPQKFALVHKVFGASNVSKMLQELPVDKRGDAVSSLVYEAHARVRDPVYGCVGAISYLQNQVSELQMQLAVAQAEILCIQMQQEPLMPNPDMEQVPSDNHKSYLLHNELPQYLNYNYASSSNVIYDSLSRESIFGHDMVS 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2025 170 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Aed7g2025 170 Coils Coil 85 105 - -
Aed7g2025 170 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
Aed7g2025 170 PANTHER LOB DOMAIN-CONTAINING PROTEIN-RELATED 1 162 - -
Aed7g2025 170 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2025 Aed-Chr7 23029228 23030685 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2025 3 135 AS2 family AT2G30130 77.444 7.91e-72 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aed7g2025 LOB 4.7e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2025 - - gmx:100805733 301.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g2025 7 23029228 23030685 Aed3g2192 3 25516483 25517234 PCT