Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed7g2025 | ATGGCTGGGAATTCTCCATGTGCTTCATGCAAGTTGCTGAGACGCAGGTGTAGCAAAGACTGTATCTTTGCTCCTTATTTCCCTTCCAATGATCCTCAAAAGTTCGCCTTAGTTCACAAGGTTTTTGGTGCTAGCAATGTCAGCAAAATGCTTCAGGAACTTCCAGTTGATAAGAGAGGTGATGCTGTGAGTAGTTTGGTGTATGAAGCACATGCAAGAGTTCGAGACCCTGTGTATGGTTGTGTTGGAGCCATATCCTATCTGCAAAACCAGGTTTCTGAGCTTCAAATGCAGCTTGCAGTGGCTCAAGCAGAGATACTCTGCATCCAGATGCAACAGGAGCCGTTGATGCCAAACCCAGATATGGAACAAGTCCCATCAGATAATCACAAATCTTACCTTCTCCATAATGAACTCCCTCAGTACCTCAACTATAACTATGCCTCTTCTAGCAATGTAATTTATGATTCTCTCTCAAGAGAGAGCATTTTTGGACATGACATGGTTTCTTGA | 513 | 0.4347 | MAGNSPCASCKLLRRRCSKDCIFAPYFPSNDPQKFALVHKVFGASNVSKMLQELPVDKRGDAVSSLVYEAHARVRDPVYGCVGAISYLQNQVSELQMQLAVAQAEILCIQMQQEPLMPNPDMEQVPSDNHKSYLLHNELPQYLNYNYASSSNVIYDSLSRESIFGHDMVS | 170 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed7g2025 | 170 | ProSiteProfiles | LOB domain profile. | 5 | 106 | IPR004883 | - | |
Aed7g2025 | 170 | Coils | Coil | 85 | 105 | - | - | |
Aed7g2025 | 170 | Pfam | Lateral organ boundaries (LOB) domain | 6 | 103 | IPR004883 | - | |
Aed7g2025 | 170 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN-RELATED | 1 | 162 | - | - | |
Aed7g2025 | 170 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 1 | 162 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed7g2025 | Aed-Chr7 | 23029228 | 23030685 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed7g2025 | 3 | 135 | AS2 family | AT2G30130 | 77.444 | 7.91e-72 | 213 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | LOB | Aed7g2025 | LOB | 4.7e-42 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed7g2025 | - | - | gmx:100805733 | 301.982 |