Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2013 GACTCGCATAATCAAGCTGGTATTGCTCATAGCGGAGGTATAGAGCCTCTGCTCAATCATCTTGACTTAAACAATACAGTTCACCTCCAACGAAATGCTGCTTTTACGCTCTGTTGTCTTGCCAAGAATGAGGACATTGTTGCAGATATTATTAAGGTCGGTGTTTTTCAAAAATTGAAGGATGGACATTATGAAGATCAAGTATTGAAACGCCTAGTATATCTTGTGCGCTTTGCGGAAAGAGAGGTTCAAAGACTTGTAACTCTTGCTCTTGCTTGTTTATGTTCTCCTCGTGATTGTAAAACTATATTCATTGACAATAATGGATTAGAAATACCGCTCAATATACTTGAATCTCCAAATGTAATTCAGAAGGGTGTTACTTTAGAGGCGCTTCACAAATTGCCTGCCAAAGCAAGTAGAAGTTTTTATGCTCAAAGAGATTGTTTACTTTCTTCTTCTGATGTATTTCAGACAATGCTTGATGCCAGCTGCAGGGAAAGGGAAGGCAAGCATGTAGTGATTCAAAATATTAAATGGGATGTCTTTGAATTGATGATGAGGTGCATTTTCTATTTATATGCACCCGGAACAGTTGATGTCAACGTGGATATTGCTCAAGACCTCCTTATAGTTGCAGATCGATATCATCTAGACGGCCTTAAGCGTATTTGTGAACATGTTATTCTTCAGGATATTTCTATGGAAAATGTTGCACTTATGTACGAGATGTCGGAGAATTTCAATGCTACTACATTAAAACATGCATGTATATTGTTAATGTTGGAGAAATTTGATGAACTGAGTTCTAAACAATGGTATGTATCATTTTTTTACAACTTAAACAGTACTTTCATGGATTCGGAGTATTCAATCATATCTGTGTTCTATATCTTTCCAATTTTCAATATTCAATATGCAGGTATTGTCCACTGGTGTGTCGCATTGTACCAGACGTAA 960 0.3677 DSHNQAGIAHSGGIEPLLNHLDLNNTVHLQRNAAFTLCCLAKNEDIVADIIKVGVFQKLKDGHYEDQVLKRLVYLVRFAEREVQRLVTLALACLCSPRDCKTIFIDNNGLEIPLNILESPNVIQKGVTLEALHKLPAKASRSFYAQRDCLLSSSDVFQTMLDASCREREGKHVVIQNIKWDVFELMMRCIFYLYAPGTVDVNVDIAQDLLIVADRYHLDGLKRICEHVILQDISMENVALMYEMSENFNATTLKHACILLMLEKFDELSSKQWYVSFFYNLNSTFMDSEYSIISVFYIFPIFNIQYAGIVHWCVALYQT 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2013 319 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 1 140 IPR044282 -
Aed7g2013 319 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 141 278 IPR044282 -
Aed7g2013 319 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 PROTEIN 141 278 - -
Aed7g2013 319 SUPERFAMILY POZ domain 141 231 IPR011333 -
Aed7g2013 319 SUPERFAMILY ARM repeat 2 136 IPR016024 -
Aed7g2013 319 Pfam BTB/POZ domain 140 231 IPR000210 GO:0005515
Aed7g2013 319 Gene3D - 1 131 IPR011989 -
Aed7g2013 319 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 PROTEIN 1 140 - -
Aed7g2013 319 Gene3D Potassium Channel Kv1.1; Chain A 132 272 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2013 Aed-Chr7 22940757 22942831 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Aed7g2013 BTB 6.8e-11 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2013 - - gmx:100783124 303.138