Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2004 ATGTCGATTCCGGCGATCATGAAGGTTCTCGGCGTGGTTCCCGCGGTGATGATGATTCTCGTGGTGGCCGTGCTCGCGGAACTGTCGGTGGACTTCCTCATGCGGTTCACGCACTCCGGCGAATCGACGACGTACGCCGGCGTCATGAGGGAAGCGTTCGGAGCGCCGGGAGCGTTGGCCGCGCAAGTTTGCGTCATCATCACCAACGCTGGGGGTTTAATTCTCTACCTTATCATCATCGGGGATGTGCTATCTGGAAAGCAAGATGGAGATGAAGTGCATTTGGGAATTTTGCAACAGTGGTTTGGAGTTCAGTGGTGGAATTCCCGGGAATTTGCTCTGCTTTTCACCTTGGTCTTGGTTATGCTTCCATTGGTATTGTACAAACGTGTAGAGTCCTTGAAGTACAGTTCTGCAGTGTCAACTCTTCTTGCAGTGGCATTTGTTGGCATATGTTGTGGGTTGGCTATAGCTGCTCTGGTGCAAGGAAAAACACAAACTCCTAAATTGTTTCCTCGGTTAGACTACCAAACCTCATTCTTTGACCTGTTCACTGCAGTTCCTGTTGTGGTCACAGCCTTCACATTTCATTTTAATGTGCATCCGATTGGGTTTGAGCTTGCGAAGACATCCCACATGACAACAGCAGTTCGATTAGCATTATTGCTGTGTGCTGTGATCTACATTACAATAGGCCTATTTGGGTACCTGTTATTTGGGGATTCAACCCAGTCAGACATTCTCATCAATTTTGACCAGAATGCTGATTCTGCGGTTGGTTCCTTGTTGAATAGTTTGGTCCGTGTAAGCTATGCACTACACATCATGCTGGTGTTTCCACTAGTGAACTTCTCTTTGAGATCCAACATAGATGAAGTGCTCTTCCCCAAGAAGCATCTGCTAGCCACAGACACCAAAAGATTTGTGATCCTCACCCTGGTGCTGCTTGTATTCTCCTACCTTGCAGCTATAGCAATCCCAGATATTTGGTACTTCTTTCAGTTCCTGGGATCATCATCCGCAGTGTGCCTTGCCTTCATTTTCCCCGGCTCTATTGTTTTAAGGGATGCTCATGGTATATCAACGAGAAGAGACAAAATTATTGCACTGATAATGATCATACTAGCTGTGGTTACAAGTGTGCTTGCCATTTCGACCAACATATATAATGCTTTTAGTAGCAAGTCATAA 1191 0.4643 MSIPAIMKVLGVVPAVMMILVVAVLAELSVDFLMRFTHSGESTTYAGVMREAFGAPGALAAQVCVIITNAGGLILYLIIIGDVLSGKQDGDEVHLGILQQWFGVQWWNSREFALLFTLVLVMLPLVLYKRVESLKYSSAVSTLLAVAFVGICCGLAIAALVQGKTQTPKLFPRLDYQTSFFDLFTAVPVVVTAFTFHFNVHPIGFELAKTSHMTTAVRLALLLCAVIYITIGLFGYLLFGDSTQSDILINFDQNADSAVGSLLNSLVRVSYALHIMLVFPLVNFSLRSNIDEVLFPKKHLLATDTKRFVILTLVLLVFSYLAAIAIPDIWYFFQFLGSSSAVCLAFIFPGSIVLRDAHGISTRRDKIIALIMIILAVVTSVLAISTNIYNAFSSKS 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2004 396 PANTHER AMINO ACID TRANSPORTER 1 394 - -
Aed7g2004 396 Pfam Transmembrane amino acid transporter protein 2 385 IPR013057 -
Aed7g2004 396 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 1 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2004 Aed-Chr7 22876701 22879215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2004 1 390 Amino Acid or Auxin Permease AAAP Family AT3G56200 60.513 2.45e-169 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2004 - - gmx:100815694 666.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g2004 7 22876701 22879215 Aed3g2211 3 25616848 25617807 PCT
Aed3g2213 3 25622165 25624575 Aed7g2004 7 22876701 22879215 PCT