Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2002 ATGGTTTCTAGAGAGCAAAAGAGAGCAGCACTGCATGAGAAGCTTCAACTTCTTCGTTCTATTACCAACTCTCATGCCCTAAACAAAACCTCGATCATAATAGATGCATCAAAGTATATCGAAGAGTTAAAGCAAAAAGTAGAAAGACTGAATCAAGACGCAGCCAATGCACAAACCTCAAGTGACCCAAATACTTTGCCCGTGGTTACAGTAGAAACCTTTGAAAATGGTTTTCTTATAAATGTTTATTCAGCAAAGAGCTGCCCCGGTCTGCTTGTTTCCATATTGGAGTCATTTGAAGAGATGGGTCTCAATGTGCTTGAAGCTAGGGTTACTTGTACAGACACCTTTCGATTTCATGCTGTCGGAGGAAAAAATGAAGAACAAGGTGAGGGTATTGATGCACAAGCTGTGAAACAGGCAATGGGACAAGCAATAAAGAACTGGAGCCAAAATGCTGACCAAAAGTAA 471 0.4076 MVSREQKRAALHEKLQLLRSITNSHALNKTSIIIDASKYIEELKQKVERLNQDAANAQTSSDPNTLPVVTVETFENGFLINVYSAKSCPGLLVSILESFEEMGLNVLEARVTCTDTFRFHAVGGKNEEQGEGIDAQAVKQAMGQAIKNWSQNADQK 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2002 156 CDD ACT_UUR-ACR-like 89 146 - -
Aed7g2002 156 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 2 155 - -
Aed7g2002 156 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 2 155 - -
Aed7g2002 156 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 6 64 IPR036638 GO:0046983
Aed7g2002 156 Coils Coil 33 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2002 Aed-Chr7 22868017 22869384 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2002 11 142 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 29.861 6.99e-11 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2002 - - gmx:100814138 280.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g2002 7 22868017 22869384 Aed3g2215 3 25641972 25643515 PCT