Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2001 ATGGATTGTTGTGTGTGTACAACTATGCCAATGATACTAAGGCCTCCCAGGAATACAATATGTGGAGCTTGTTACGAAGGAGTTAGGACCATAATCAACATGATGACCAATGTTGAAACTGAGAAAGTAAAACCAATGGTTAATCCAAATCCAGTTTTGCGGCGAAATTCGAGTAAGGCAAGCTCTAATTCATTTCATATTTTTAAATTGGGTAATTATTATAACATTGACAATAATTTTCCTCCGCAGACACTTGATGATTGTATAAGATGGTGTTCAGAGCAGACCGAACAGTTTAATCAACAAAAAGAAGACATGGTTTTCCTCAGAGGCTTTGCTGCAGCCTTCAAAGCACAGATTCACACGGATATATTGGTCACTCCAGGCAGGCATGGTCCACCTATACCTGCACATAAATCCGTTTTGGCAGCAAGATCAGAAATATTTAAGAACATGCTAGAGTGCGATGAATGCAAGGCAGCACCAAGTAACAGCATAACTATACCCGAATTGAACCATGAAGAACTAGAGTCTCTCCTCGAATTTCTCTACAGTGGGGCCTTGGCGGTGGAAAAATTGGAGAAACATGTTTACGCGTTGTCACAAGCAGCTGATAAGTATGTAATCCCACATTTGCTGAAACACTGCGAACGATTTCTCCTGAGTTCTCTAAGCACTTCTAATGCCCTTGAGACATTAGAGATTGCGGATACTTGTTCCAACCACAACTTGAAGGAGACGACCTTGAATTTCTTAGTTAAAAACATTGAGCACATGGTATCCTCACCCAACTTTGAAGCTTTTGTGCACAGGTGTCCACACCTAACTGTGCAACTAGTTACTAGGGCGTTTGTGAATGGTGCCAAATAA 870 0.4103 MDCCVCTTMPMILRPPRNTICGACYEGVRTIINMMTNVETEKVKPMVNPNPVLRRNSSKASSNSFHIFKLGNYYNIDNNFPPQTLDDCIRWCSEQTEQFNQQKEDMVFLRGFAAAFKAQIHTDILVTPGRHGPPIPAHKSVLAARSEIFKNMLECDECKAAPSNSITIPELNHEELESLLEFLYSGALAVEKLEKHVYALSQAADKYVIPHLLKHCERFLLSSLSTSNALETLEIADTCSNHNLKETTLNFLVKNIEHMVSSPNFEAFVHRCPHLTVQLVTRAFVNGAK 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2001 289 Gene3D Potassium Channel Kv1.1; Chain A 89 224 IPR011333 -
Aed7g2001 289 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED-RELATED 1 288 IPR044784 -
Aed7g2001 289 Gene3D - 225 287 - -
Aed7g2001 289 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED 1 288 - -
Aed7g2001 289 Pfam BTB/POZ domain 118 223 IPR000210 GO:0005515
Aed7g2001 289 SUPERFAMILY POZ domain 107 223 IPR011333 -
Aed7g2001 289 SMART BTB_4 122 224 IPR000210 GO:0005515
Aed7g2001 289 CDD BACK 225 265 - -
Aed7g2001 289 ProSiteProfiles BTB domain profile. 122 192 IPR000210 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Aed7g2001 BTB 1.1e-20 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2001 K10523 - gmx:100814664 475.322