Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1997 ATGGAGAAAAGAGGGAATGTATTGATGGAAAAGTATGAGTTTGGGAAGCTATTAGGTCAAGGAACCTTTGCGAAGGTTTACCATGCAAGGGATGTCAAAACTGGTGAGAATGTTGCCATTAAGGTGATTGACAAGGAGAAAGTTCTAAAAATTGGGCTGGTGGAGCAGACGAAGCGAGAGATTTCGATTATGAGACGGGTTAAACACCCCAATGTTTTGCAGCTTTATGAGGTCTTAGCCACCAAGACCAAGATTTACTTCATCATTGAGTATGCCAAAGGGGGTGAGCTTTTCAACAAGGTGGCTAAAGGTAAACTCACTGAGGACAAGGCAAGGAAATACTTTCAACAATTGGTCAGTGCTGTTGATTTTTGCCACAGCAGAGGTGTTTATCACAGGGATTTGAAGCCAGAGAACTTGCTTTTAGATGAGAATGGAGTTCTCAAGGTAGCGGATTTTGGATTGAGTGCACTTGTTGAGTCTCACCGTCAGAACGACATGCTGCATACAATTTGTGGAACTCCAGCATATGTGTCTCCTGAGATTATAAGCAGAAGGGGCTATGATGGAGCAAAAGCTGATGTATGGTCTTGTGGAGTGATCTTATATGTTCTGTTGGCTGGTCATTTGCCATTCTATGATTTGAATCTTATGTCACTGTATAGGAAAATAGCCAAGGCTGAATACAAATGTCCAAGCTTTTTTTCTGTGGAAGTGCGCAGACTGTTAGAGAAAATCCTTGATCCCAACCCGAATACCAGGATATCCATGGAAAAACTTATGGGAAATTCTTGGTTCAGAAAAGGACTCAAACCCAACAAATCTGCTCAAGTTAAAAAAGAGGCTGTTAACAATGTGGCTTTAGTTGATTCTGATAAAGTTTTTGGCTTGTGTGAGAATACAAGTGCTAGTGCTGCTGTTGTTGTTGAGGCAGAACAAGCATTGGTTAAACCTGCACATTTTAATGCTTTCAATATAATTTCTCTGTCTGCTGGACTTGACTTGTCTGGCCTTTTTGCTGGCAATGTTGAACTGGATGATACCAAATTTGCATTCATGAGCTCTTCCTCATCCATCACGTCTACAATGGACGATATCGCTCGTGTTTTGAAGATGGAGATAACAGTTAAGAAGGATGGAGGGTTGCTGAAATTGGAGAGATCCGGGGAAGGTAGAAAAAGATCACTTTCCATAGATGCTGAGATATTTGAGGTCGTGCCGTCTTTCCATTTGGTCGAGTTGAAGAAGTCCTGTGGTGATACATTAGAATACCAGAAGATACTGAAGGAAGATTTAAGACCATCTCTCAAAGATATTGTTGGTGTTTGGCAAGGTGAGCAGTATCTGGTGGTGCAGTAG 1359 0.4157 MEKRGNVLMEKYEFGKLLGQGTFAKVYHARDVKTGENVAIKVIDKEKVLKIGLVEQTKREISIMRRVKHPNVLQLYEVLATKTKIYFIIEYAKGGELFNKVAKGKLTEDKARKYFQQLVSAVDFCHSRGVYHRDLKPENLLLDENGVLKVADFGLSALVESHRQNDMLHTICGTPAYVSPEIISRRGYDGAKADVWSCGVILYVLLAGHLPFYDLNLMSLYRKIAKAEYKCPSFFSVEVRRLLEKILDPNPNTRISMEKLMGNSWFRKGLKPNKSAQVKKEAVNNVALVDSDKVFGLCENTSASAAVVVEAEQALVKPAHFNAFNIISLSAGLDLSGLFAGNVELDDTKFAFMSSSSSITSTMDDIARVLKMEITVKKDGGLLKLERSGEGRKRSLSIDAEIFEVVPSFHLVELKKSCGDTLEYQKILKEDLRPSLKDIVGVWQGEQYLVVQ 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1997 452 Pfam NAF domain 318 375 IPR004041 GO:0007165
Aed7g1997 452 SUPERFAMILY Protein kinase-like (PK-like) 8 284 IPR011009 -
Aed7g1997 452 Gene3D Kinase associated domain 1, KA1 321 443 - -
Aed7g1997 452 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g1997 452 CDD CIPK_C 322 437 - -
Aed7g1997 452 PANTHER - 2 447 - -
Aed7g1997 452 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 2 447 - -
Aed7g1997 452 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g1997 452 Gene3D Transferase(Phosphotransferase) domain 1 3 320 - -
Aed7g1997 452 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Aed7g1997 452 ProSiteProfiles NAF domain profile. 316 340 IPR018451 GO:0007165
Aed7g1997 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Aed7g1997 452 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1997 Aed-Chr7 22841989 22843347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1997 1 447 CBL-interacting serine-threonine protein kinases AT5G58380 58.720 0.0 546
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Aed7g1997 Pkinase 4e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1997 K07198 - gmx:100816254 770.77