Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1989 ATGAATTCAGCATCCCCGCAGTTCGTTTCCTCGAGAAGGATGAGTGTGTACGATCCGATCCACCAGATTAGTATGTGGGGAGAAGGCTTCAAAAGTAATGGAAATTTAAGTGCAGCCATGCCTTTGATTGATGAGGAAGACTTGAAGTTAGATAGTCAGTCAGAGGATGCTTCTCATGGTATACTGGGAGCACCTAATAAGTATGACCAAGAAGCTAACAAACCAACTGAAAAGATACAAAGACGTCTAGCACAAAATCGAGAGGCCGCTCGGAAGAGCCGTTTGAGGAAAAAGGCCTATGTGCAGCAGCTAGAATCAAGTCGTTTGAAGTTGATGCAGTTGGAGCAAGAGCTTGAACGTGCAAGACAGCAGGGAATGTATATAGGTGGTGGTTTGGATTCTAGTCATCTGGGTTTTTCTGGATCAGTAAATTCAGGAATTACAACCTTTGAGCTGGAGTATGGACACTGGGTGAATGAGCAAAATAGACAAATCACAGAACTAAGAAGTGCTTTAAATGCTCATATTGGTGACGTAGAGCTCAGGATTTTAGTAGATGGTATGATGAACCACTATGCGGAAATGTTTCGCATGAAATCTGCTGCTGCAAAAGCAGATGTTTTCTATGTTCTTGGTCCCCTGATTGAACCCCTGACGGAGAAACAACGGTTGGATATCTATAACCTTGGACAATCATGTCAGCAAGCAGAAGATGCCCTTTCACAAGGTATGGACAAACTTCGGCAAACACTTGCTGATAGTGTAGCAGCTGGACAGTTCATGGAAGGAACGTATATTCCACAGATGACTTCTGCAATGGAGAAGCTCGAAGCTCTGGTGAGCTTTGTGAACCAGGCTGATCATCTTCGACAAGAAACCTTGCAGCAAATGTCTCGAATACTTACAATCCGTCAGGCGGCTCGATGTTTGCTTGCTCTGGGGGAATATTTCCAACGCCTGAGGGCTTTGAGCTCACTGTGGTCTAATAGACCCCGCGAACCTGCTTAG 1008 0.4484 MNSASPQFVSSRRMSVYDPIHQISMWGEGFKSNGNLSAAMPLIDEEDLKLDSQSEDASHGILGAPNKYDQEANKPTEKIQRRLAQNREAARKSRLRKKAYVQQLESSRLKLMQLEQELERARQQGMYIGGGLDSSHLGFSGSVNSGITTFELEYGHWVNEQNRQITELRSALNAHIGDVELRILVDGMMNHYAEMFRMKSAAAKADVFYVLGPLIEPLTEKQRLDIYNLGQSCQQAEDALSQGMDKLRQTLADSVAAGQFMEGTYIPQMTSAMEKLEALVSFVNQADHLRQETLQQMSRILTIRQAARCLLALGEYFQRLRALSSLWSNRPREPA 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1989 335 Pfam bZIP transcription factor 78 112 IPR004827 GO:0003700|GO:0006355
Aed7g1989 335 PANTHER TRANSCRIPTION FACTOR TGA9 210 334 - -
Aed7g1989 335 Coils Coil 97 124 - -
Aed7g1989 335 PANTHER TRANSCRIPTION FACTOR TGA9 1 211 - -
Aed7g1989 335 SUPERFAMILY Leucine zipper domain 78 120 IPR046347 GO:0003700|GO:0006355
Aed7g1989 335 PANTHER TRANSCRIPTION FACTOR TGA1 1 211 - -
Aed7g1989 335 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 81 96 IPR004827 GO:0003700|GO:0006355
Aed7g1989 335 SMART brlzneu 74 134 IPR004827 GO:0003700|GO:0006355
Aed7g1989 335 Gene3D - 76 126 - -
Aed7g1989 335 Pfam Seed dormancy control 164 214 IPR025422 GO:0006351|GO:0043565
Aed7g1989 335 ProSiteProfiles DOG1 domain profile. 147 330 IPR025422 GO:0006351|GO:0043565
Aed7g1989 335 PANTHER TRANSCRIPTION FACTOR TGA1 210 334 - -
Aed7g1989 335 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 76 120 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1989 Aed-Chr7 22774483 22778986 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1989 1 335 Calmodulin-binding Proteins AT5G65210 61.957 1.36e-160 451
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aed7g1989 DOG1 2.3e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1989 K14431 - gmx:100793353 614.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2040 5 22989255 22991822 Aed7g1989 7 22774483 22778986 PCT