Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1978 ATGCGTCACCCTCACACTAGCATACCTGCTTCGCTTCTCACAAAGCTGGCGACTGCACTGACTTGGAGGTTTGCTGCCAATAATGGCAGCACCCTTGCTGCTAATGATATGGAAAGAAATGGTGATGGGAAAGCTCAAGATTCAGAGCCTCTACATCCTCATTCTGTTCTGAAGATGGGATTGAGAGATCGTAGCAACAGCAGCAGCATGGAAGATCCAGATGGGACATTAGCAAGTGTTGCCCAATGCATTGAGCAGCTGCGTCAGAGCTCATCTAATATGCAAGAGAAAGAGTATTCTTTGAAGCAGTTATTGGAGCTTATTGATATGCGAGAAAATGCTTTCAGTGCTGTTGGGTCTCATTCTCAGGCAGTTCCAGTACTTGTTTCCCTTCTCCGGTCAGGGTCATTGAATGTGAAGATACAGGCAGCAACTGTCTTGGGCTCACTTTGTAAAGAAAATGAGCTGAGGGTGAAAGTCTTGCTTGGAGGTTGCATTCCTCCTTTGCTTGGTCTACTCAAGTCCAGTTCTGCTGAAGGTCAAGTAGCTGCAGCAAAGACTATTTTTGCTGTCTCTCAAGATGGTGCCAAAGATCACGTTGGATCAAAAATATTTTCAACTGAAGGAGTTGTTCCAGTGCTATGGGAGCAGCTGCAAAAGGGCCAGAAGTCTGGAAATGTAGTTGATAATTTATTGACTGGGGCATTGAAAAATCTCTCCAGTAGCACTGAGAGATTCTGGAATGCCACAATACAAGCTGGAGGAGTGGACATATTAATTAAGTTATTGACAACAGGGCAGTCTAGCACTTTAGCAAATGTGTGCTTTTTACTTGCCTGTATGATGATGGAGGATGCATCTGTTTGTTCAAAGTTGTTGACAGCAGAGGCAACAAAACAACTCCTCAAACTTTTAGGTGCTGGTAATGATGCCCCTGTCAGGGCTGAGGCAGCAGGTGCTCTTAAATCTCTATCTGCCCAGTCCAAAGATGCAAGGAAAGACATAGCCAATTCCAATGGAATTCCTGCTTTGATTAATGCTACCATAGCTCCTTCCAAAGAGTTCATGCAGGGTGAGCATGCTCAAGCGTTACAGGAGAATGCTATGTGTGCTTTAGCAAACATCTCTGGTGGTTTGTCATATGTCATCTCCAGTCTTGGTCAAAGCCTTGAATCATGCTCCTCTCCTACTCAAGCTGCTGACACATTGGGGGCTTTAGCTTCAGCTCTTATGATATATGACGACATGGCAGAATCTACCAGGGCATCAGATCCTTTGGTAGTTGAGCAGACATTACTTGAACAATTTAAACCTCGCTTGCCATTCCTTGTGCAGGAACGGACCATTGAAGCCCTAGCTAGCTTGTATAGCAATCCTATACTGTCAATTAAACTTACAAATTCTGATGCAAAGCGTTTGCTTGTTGGTTTAATAACAATGGCTGCTAATGAAGTGCAAGATGAGCTTCTAAAATCTCTCTTGACATTGTGCAATACTGAATGCAGTCTATGGCATGCACTTCAAGGCCGTGAAGGAGTTCAGCTGTTGATATCTCTTCTGGGGCTTTCATCAGAACAGCAGCAAGAGTGTGCTGTTGCCCTCCTTTGCCTTTTATCTAATGAAAATGATGAAAGCAAATGGGCCATTACTGCCGCTGGTGGTATACCTCCTCTTGTTCAAATTTTGGAGTCAGGATCTGCAAAAGCAAAGGAAGACTCAGCAACAATCCTTAGGAATCTATGCGATCATAGTGAGGATATACGTGCTTGTGTTGAAAGTGCTGATGCTGTTCCTGCATTGCTGTGGCTGTTGAAGAATGGAAGCCCAAATGGGAAGGAGATTGCAGCAAAGACTTTGAATCACTTAATTCATAAATCTGATACAGCAACTATCAGTCAGCTTACAGCGTTATTGACCAGTGATTTACCTGAATCTAAGCTTTATGTTTTAGATGCTTTGAGAAGTATGCTTTCAGTTGTTGCTCTTACTGATCTAGTACGTGAGGGTAGTGCTGCCAGTGATGCAATAGATACAATGATAAAACTATTGAGCTCAACCAAGGAAGAAACTCAGGCAAAGTCTGCATCTGCTCTGGCGGGAATTTTTGAAACAAGGAAAGATGTGCGTGAAAGCATCATTGCTGTTAAAACTCTCTGGTCAGCAATGAAGTTGCTTAATGTTGAATCTGAAAGTATCTTAATGGAGTCCTCACGCTGCTTGGCTGCAATTTTTCTTTCCATCAAAGAGAACAGGGATGTGGCTGCTATTGCTAGAGATGCATTACCCTCCCTAGTTGCACTAGCCAACTCTTCAGTTTTAGAAGTGGCAGAGCTGGCAACATGTGCTGTGGCAAATCTTATTTTGGATAGTGAAATTGCTGAGAAAGCTGTTGCAAACGAAGTCATCTTGGCTGCTACCAGAGTATTACGTGAAGGCACAATTTCTGGAAAAACACATTCTGCTGCAGCAATTGCTCGCCTCTTACATTCTAAGAGGCAAGTTGATTATGCTATAGCTGATTGTGTGAATCGAGCTGGCACTGTTCTTGCATTAGTTTCTTTCTTAGACTTTGCTATTGATGGACATAGTTCCACATCAGAAGCTCTAGAAGCACTTGCCATGCTGTCCAGGTCAGATGTGACTGGTGCACCCAGTAAACCTGCTTGGGCAGTTTTAGCTGAATTTCCTAAAAGCATAAGCCCAATAGTTTTGTCTATTGCTGATTCAACGCCAGTGTTGCAGGATAAAGCTATTGAAATATTATCTCGATTATGTAAGGATCAACCTTTTGTTCTGGGAGACACTGTTGTAACTGCTTCTGGATGTATATCTTCTATAGCTAAGAGGATAATCAATTCCACTTCTAAAAATGTAAAGGTCAAAATTGGAGGAGCTGCTATTCTTATTTGTGCTGCTAAAGTAAATCATCAGAGACTAGTGGAGGATCTCAATTTATCAAACTTGTGTGCTAATCTTGTTCAGTCTCTTGTCAATATGCTTATATCTTCGCAGGCTACTTTGGATAATCACAGTGATGACATCAGGGAAGTTATCAGCATTTGCAGGCATACAAAAGAAGCCAATGATGGTAAATCAAGCACTGGCACTGCTATTATTTCCGGTGCCAACTTAGCTATATGGTTATTGTCTGTCCTTGCTTGCCATGATGAAAAAAGTAAAATTGCAATAATGGAGGCTGGAGCAATTGATGTTGTCACTGACAGGATTGCAAATTGTTTCTCACAATATAGTCAGATTGACTATAAAGAAGATAGTAGCATGTGGATTTGTGCTTTGTTGTTGGCAGTATTATTTCAAGATAGGGATATCATACGAGCACATGCAACCATGAAATCTATACCAGCTCTTGCCAACTTATTGAAGTCAGAGGAATCAGCAAACAGATATTTTGCTGCACAATCCATAGCTAGCCTAGTCTGTAATGGTAGCAGGGGAACACTTCTGTCTGTGGCAAATTCTGGGGCAGCTGGTGGACTTATCTCTTTGCTTGGCTGTGCTGATACTGACATACAGGATCTTCTTGAAATGTCAGATGAATTTAATTTGGTGCATTATCCTGATCAAGTCGCTCTTGAGAGGTTGTTTAGAGTTGATGACATAAGAAGTGGTGCCACTTCTCGGAAGGCAATACCTGCTCTAGTTGATCTGCTCAAACCAATTCCAGAACGTCCAGGAGCACCATTTTTAGCACTTGGGCTTTTGACCCAGCTTGCTATAGATTGTCCATCGAATAAGATTGTAATGGTTGAGGCAGGGGCCTTAGAGGCACTTTCTAAGTATCTTTCACTAGGTCCACAAGATGCAACGGAAGAAGCTGCTACAGATCTGTTAGGAATTCTGTTTAGCAGTGCAGAAATTCGGAGACATGAGTCAGCATTTGGAGCTGTTACTCAACTTGTAGCTGTCCTGCGTTTAGGAGGAAGAGCCGCAAGGTATAGGGCTGCAAAAGCTTTGGAAAGTTTATTCTCAGCTGACCATATTAGAAATGCAGAGACTGCTCGACAAGCTGTTCAACCATTGGTGGAGATTCTTAATACTGGTTTAGAGAGAGAGCAGCATGCTGCAATTGCTGCATTAGTTAGGTTACTGAGTGAAAACCCTTCAAGAGCACTTGCTGTTGCAGATGTTGAGATGAATGCAGTGGATGTTCTTTGCAGGATTCTTTCATCAGATTGCTCAATGGACCTCAAAGGGGATGCTGCTGAATTATGTTCTGTTCTTTTTGGAAATACAAGGATTCGGTCCACAATGGCTGCTGCACGTTGTGTTGAACCTCTGGTTGCTCTCCTTGTAAGTGAGTTTAGTCCTGCTCATCATTCAGTTGTGCGGGCATTGGATAGGCTTGTTGATGATGAGCAACTGGCTGAATTAGTTGCTGCACATGGTGCAGTTATTCCTCTTGTTGGCCTACTTTATGGTAGGAATTATGTAATTCATGAGGCCATTTCCAGAGCTCTGGTCAAGTTAGGAAAAGACAGGCCAGCTTGTAAAATGGAAATGGTGAAAGCTGGAGTTATTGAAAGCATACTTGACATCCTTCATGAAGCACCTGATTATCTATGTGCAGCTTTTTCAGAATTGTTGCGTATATTGACCAATAATGCTAGCATAGCTAAAGGACCATCGGCTGCTAAAGTAGTTGAACCCCTGTTTATGTTGCTGACAAGAGAAGAATTTGGGCCAGATGGACAACATAGTGCATTGCAGGTTTTGGTTAATATCTTAGAACATCCGCAGTGTCGTGCTGATTACACATTGACTTCTCACCAAGTTATTGAGCCTCTTATCCCTTTGCTTGATTCTCCAATATCAGCAGTGCAACAGTTGGCTGCTGAGCTTCTCTCGCATCTACTTTTAGAAGAACACCTTCAGAAAGATCCAGTGACGCAACAGGTAATTGGCCCTCTTATACGAGTTCTTGGTTCTGGTATACATATATTGCAGCAGAGAGCTGTAAAGGCGCTGGTAAGTATTGCACTGATATGGCCAAATGAAATTGCAAAAGAGGGCGGTGTTATTGAAATTTCAAAAGTTATATTGCAAGCTGATCCTTCCATTCCTCATGCTTTATGGGAGTCTGCTGCCTCTGTTTTGGCTAGTATTCTGCAATTTAGTTCTGAATACTACTTGGAAATTCCAGTTGCTGTTTTGGTTAGGCTGCTCAGATCTGGCTTAGAAAGCACAGTTGTTGGTGCATTAAATGCTCTTCTTGTGTTGGAAAGTGATGATGGAACTAGCGCTGAAGCAATGGCTGAAAGTGGTGCTATAGAGGCTCTCTTGGAGCTCCTAAGATCTCATCAGTGCGAGGAAACTGCTGCAAGACTCTTAGAAGTATTGCTTAACAATGTAAAGATCAGAGAAACAAAAGTTACTAAATCAGCCATCTTACCATTATCCCATTATCTCTTGGACCCACAAACCCAAGCACAACAAGCAAGGTTATTAGCAACTTTGGCTCTTGGCGATCTATTTCAGAATGAGGGCCTTGCTCGGTCTAGTGATTCAGTTTCAGCTTGTCGTGCTTTAGTGAATGTGCTTGAAGACCAACCAACTGAAGAAATGAAAGTTGTAGCCATATGTGCTCTGCAAAACCTTGTGATGTACAGTCGATCAAATAAAAGAGCAGTTGCAGAGGCTGGTGGGGTTCAGGTTATACTGGATTTGATAGGTTCAAGTGATCCTGAAACATCGGTTCAGGCTGCAATGTTTATTAAACTTCTATTTTCAAATCATACCATTCAAGAGTATGCTTCTAGTGAAACAGTCAGAGCAATAACTGCTGCTATTGAAAAGGACTTATGGGCTACTGGATCTGTGAACGATGAGTATCTTAAAGCCTTAAATTCTCTATTTAGCAACTTCCCAAGACTGAGAGCAACTGAACCAGCAACACTTACCATTCCCCATTTGGTTTCGTCCTTAAAGACAGGCTCTGAGGCTACTCAGGAAGCTGCCTTGGATGCACTTTTCCTGCTTAGGCAAGCTTGGTCAGCCTGTCCAGCAGAAGTTTCAAGAGCTCAGTCAATAGCAGCTGCAGATGCTATTCCTTTGCTGCAGTACTTAATCCAGTCTGGCCCACCTCGCTTTCAGGAGAAGGCAGAATTTTTATTGCAGTGTTTGCCAGGAACGTTGGTGGTGATCATCAAGCGCGGTAACAATATGAAGCAATCTGTTGGAAATCCAAGTGTTTTTTGCAAGCTTACACTTGGAAACACTCCTCCAAGGCAAACCAAGGTGGTCTCAACTGGCCCTAATCCGGATTGGGATGAGAGCTTTACATGGTCCTTTGAGAGTCCTCCAAAAGGCCAGAAGCTTCACATTTCTTGCAAAAACAAGAGCAAAATGGGAAAGAGTTCATTTGGGAAAGTGACAATCCAGATTGATCGGGTAGTAATGCTAGGAGCAGTATCTGGAGAGTACACTCTGTTGCCGGAAAGTAAAAGTGGCCCCTCAAGGAATTTAGAAATAGAATTTCAGTGGTCTAACAAGTGA 6513 0.4267 MRHPHTSIPASLLTKLATALTWRFAANNGSTLAANDMERNGDGKAQDSEPLHPHSVLKMGLRDRSNSSSMEDPDGTLASVAQCIEQLRQSSSNMQEKEYSLKQLLELIDMRENAFSAVGSHSQAVPVLVSLLRSGSLNVKIQAATVLGSLCKENELRVKVLLGGCIPPLLGLLKSSSAEGQVAAAKTIFAVSQDGAKDHVGSKIFSTEGVVPVLWEQLQKGQKSGNVVDNLLTGALKNLSSSTERFWNATIQAGGVDILIKLLTTGQSSTLANVCFLLACMMMEDASVCSKLLTAEATKQLLKLLGAGNDAPVRAEAAGALKSLSAQSKDARKDIANSNGIPALINATIAPSKEFMQGEHAQALQENAMCALANISGGLSYVISSLGQSLESCSSPTQAADTLGALASALMIYDDMAESTRASDPLVVEQTLLEQFKPRLPFLVQERTIEALASLYSNPILSIKLTNSDAKRLLVGLITMAANEVQDELLKSLLTLCNTECSLWHALQGREGVQLLISLLGLSSEQQQECAVALLCLLSNENDESKWAITAAGGIPPLVQILESGSAKAKEDSATILRNLCDHSEDIRACVESADAVPALLWLLKNGSPNGKEIAAKTLNHLIHKSDTATISQLTALLTSDLPESKLYVLDALRSMLSVVALTDLVREGSAASDAIDTMIKLLSSTKEETQAKSASALAGIFETRKDVRESIIAVKTLWSAMKLLNVESESILMESSRCLAAIFLSIKENRDVAAIARDALPSLVALANSSVLEVAELATCAVANLILDSEIAEKAVANEVILAATRVLREGTISGKTHSAAAIARLLHSKRQVDYAIADCVNRAGTVLALVSFLDFAIDGHSSTSEALEALAMLSRSDVTGAPSKPAWAVLAEFPKSISPIVLSIADSTPVLQDKAIEILSRLCKDQPFVLGDTVVTASGCISSIAKRIINSTSKNVKVKIGGAAILICAAKVNHQRLVEDLNLSNLCANLVQSLVNMLISSQATLDNHSDDIREVISICRHTKEANDGKSSTGTAIISGANLAIWLLSVLACHDEKSKIAIMEAGAIDVVTDRIANCFSQYSQIDYKEDSSMWICALLLAVLFQDRDIIRAHATMKSIPALANLLKSEESANRYFAAQSIASLVCNGSRGTLLSVANSGAAGGLISLLGCADTDIQDLLEMSDEFNLVHYPDQVALERLFRVDDIRSGATSRKAIPALVDLLKPIPERPGAPFLALGLLTQLAIDCPSNKIVMVEAGALEALSKYLSLGPQDATEEAATDLLGILFSSAEIRRHESAFGAVTQLVAVLRLGGRAARYRAAKALESLFSADHIRNAETARQAVQPLVEILNTGLEREQHAAIAALVRLLSENPSRALAVADVEMNAVDVLCRILSSDCSMDLKGDAAELCSVLFGNTRIRSTMAAARCVEPLVALLVSEFSPAHHSVVRALDRLVDDEQLAELVAAHGAVIPLVGLLYGRNYVIHEAISRALVKLGKDRPACKMEMVKAGVIESILDILHEAPDYLCAAFSELLRILTNNASIAKGPSAAKVVEPLFMLLTREEFGPDGQHSALQVLVNILEHPQCRADYTLTSHQVIEPLIPLLDSPISAVQQLAAELLSHLLLEEHLQKDPVTQQVIGPLIRVLGSGIHILQQRAVKALVSIALIWPNEIAKEGGVIEISKVILQADPSIPHALWESAASVLASILQFSSEYYLEIPVAVLVRLLRSGLESTVVGALNALLVLESDDGTSAEAMAESGAIEALLELLRSHQCEETAARLLEVLLNNVKIRETKVTKSAILPLSHYLLDPQTQAQQARLLATLALGDLFQNEGLARSSDSVSACRALVNVLEDQPTEEMKVVAICALQNLVMYSRSNKRAVAEAGGVQVILDLIGSSDPETSVQAAMFIKLLFSNHTIQEYASSETVRAITAAIEKDLWATGSVNDEYLKALNSLFSNFPRLRATEPATLTIPHLVSSLKTGSEATQEAALDALFLLRQAWSACPAEVSRAQSIAAADAIPLLQYLIQSGPPRFQEKAEFLLQCLPGTLVVIIKRGNNMKQSVGNPSVFCKLTLGNTPPRQTKVVSTGPNPDWDESFTWSFESPPKGQKLHISCKNKSKMGKSSFGKVTIQIDRVVMLGAVSGEYTLLPESKSGPSRNLEIEFQWSNK 2170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1978 2170 Gene3D - 1342 1667 IPR011989 -
Aed7g1978 2170 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 553 595 IPR000225 GO:0005515
Aed7g1978 2170 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1215 1259 IPR000225 GO:0005515
Aed7g1978 2170 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 296 340 IPR000225 GO:0005515
Aed7g1978 2170 SMART arm_5 542 582 IPR000225 GO:0005515
Aed7g1978 2170 SMART arm_5 111 152 IPR000225 GO:0005515
Aed7g1978 2170 SMART arm_5 153 193 IPR000225 GO:0005515
Aed7g1978 2170 SMART arm_5 750 788 IPR000225 GO:0005515
Aed7g1978 2170 SMART arm_5 1500 1539 IPR000225 GO:0005515
Aed7g1978 2170 SMART arm_5 285 326 IPR000225 GO:0005515
Aed7g1978 2170 SMART arm_5 584 624 IPR000225 GO:0005515
Aed7g1978 2170 SMART arm_5 1585 1626 IPR000225 GO:0005515
Aed7g1978 2170 SMART arm_5 1248 1289 IPR000225 GO:0005515
Aed7g1978 2170 SMART arm_5 1417 1457 IPR000225 GO:0005515
Aed7g1978 2170 SMART arm_5 1876 1916 IPR000225 GO:0005515
Aed7g1978 2170 SMART arm_5 328 377 IPR000225 GO:0005515
Aed7g1978 2170 SMART arm_5 1330 1371 IPR000225 GO:0005515
Aed7g1978 2170 SMART arm_5 1458 1498 IPR000225 GO:0005515
Aed7g1978 2170 SMART arm_5 1749 1788 IPR000225 GO:0005515
Aed7g1978 2170 SMART arm_5 501 540 IPR000225 GO:0005515
Aed7g1978 2170 SMART arm_5 1203 1246 IPR000225 GO:0005515
Aed7g1978 2170 SUPERFAMILY ARM repeat 357 661 IPR016024 -
Aed7g1978 2170 Pfam Armadillo/beta-catenin-like repeat 121 151 IPR000225 GO:0005515
Aed7g1978 2170 Pfam Armadillo/beta-catenin-like repeat 542 582 IPR000225 GO:0005515
Aed7g1978 2170 CDD C2 2051 2141 - -
Aed7g1978 2170 SUPERFAMILY ARM repeat 631 1003 IPR016024 -
Aed7g1978 2170 SMART C2_3c 2050 2146 IPR000008 -
Aed7g1978 2170 SUPERFAMILY ARM repeat 1044 1178 IPR016024 -
Aed7g1978 2170 MobiDBLite consensus disorder prediction 33 53 - -
Aed7g1978 2170 SUPERFAMILY ARM repeat 1203 1586 IPR016024 -
Aed7g1978 2170 PANTHER CELLULOSE SYNTHASE-INTERACTIVE PROTEIN 34 2170 - -
Aed7g1978 2170 SUPERFAMILY ARM repeat 1599 2047 IPR016024 -
Aed7g1978 2170 Gene3D - 837 1188 IPR011989 -
Aed7g1978 2170 Gene3D - 1189 1318 IPR011989 -
Aed7g1978 2170 Gene3D - 632 836 IPR011989 -
Aed7g1978 2170 Pfam C2 domain 2049 2145 IPR000008 -
Aed7g1978 2170 ProSiteProfiles C2 domain profile. 2030 2147 IPR000008 -
Aed7g1978 2170 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2048 2167 IPR035892 -
Aed7g1978 2170 Gene3D - 58 419 IPR011989 -
Aed7g1978 2170 Gene3D - 1671 2048 IPR011989 -
Aed7g1978 2170 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 34 2170 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Aed7g1978 2170 Gene3D C2 domain 2049 2170 IPR035892 -
Aed7g1978 2170 Gene3D - 434 631 IPR011989 -
Aed7g1978 2170 SUPERFAMILY ARM repeat 83 393 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1978 Aed-Chr7 22705057 22715268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1978 515 637 U-box Gene Family AT2G23140 41.935 5.09e-12 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1978 - - gmx:100816765 3912.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2033 5 22923687 22934783 Aed7g1978 7 22705057 22715268 PCT