Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1973 ATGGCTTCCTCAGCGATGGAAACCTGCAAATCTGCAGATACCATGATGCAGTTGCAGGTGGACATTGAGAAGAACGTCGCACAGGATCAGGATGTAAGGTCTCAGTGGGTTCTCAACGCTCCTGATCCCCCAAGTCCGTGGCGCGTGGTTGCAGATTCTGTCAGCAAAACCATCTCTCACTATAAACATAAGTTTTCCTCTCTCACAGATCAACCCTGCTCCACACTCCTCCTTTCACTTCTGCAGCTCCTTTTTCCTATTCTTGCGTGGGGCAGAAACTACACTGCTACTAAGTTCAGGAAAGATCTTCTTGCAGGCCTCACTATTGCTAGTCTCTGTATTCCCCAGAGCATTGGATATGCCACCTTAGCACATCTTGATCCTCAATATGGCCTTTATACAAGTGTGGTACCACCACTTATCTATGCTGTAATGGGAACTTCTAGAGAGATAGCAATTGGTCCTGTGGCAGTGGTTTCTCTGCTGTTATCCTCAATGATGGAGAAATTAGTTGACCCTGCTGCTGATCCTGTGGCTTATACAAAGCTCATTTTGCTTGCTACTCTCTTTGCTGGTATCTTTCAGACTTCCTTCGGACTCTTCAGGCTGGGGTTCCTTGTGGATTTTCTATCCCATGCTGCTATAGTAGGATTTGTGGCAGGAGCAGCCATTGTGATTGGGCTTCAACAGTTAAAGGGACTCTTAGGAATCACCCATTTTACGACCAAAACCGACATAGTCTCTGTCATCAAAGCTGTTTGGGAAGAAGTTCATAATCCGTGGAACCCACGAAATTTTATCCTGGGATGCTCGTTCTTGGTCTTCATCCTAACGACGAGATTTTTGGGTAAAAGGAAGAAGAAGCTGTTCTGGTTGGCATCAATATCTCCTCTTATATCTGTAGTTGTGTCAACTCTAATTGTGTTTCTGACAAGAGCTGATAAAAATGGAGTTAAAATTGTGAAACATGTCAAAGGGGGCTTGAATCCGAGCTCCATCCATCAGTTAGACTTCAACAGCCCCTACATTGGTGAAGTTGCCAAAATTGGACTAGTGGTTGCTGTCGTTGCTCTTACTGAATCTATTGCTGTTGGGCGATCTTTTGCATCCATCAAAGGATACCAACTTGATGGAAACAAGGAGATGATATCAATAGGTATCACAAACATCATAGGATCTTTCACCTCCTGCTACGTTGCAACTGGTTCGTTCTCCCGTACTGCTGTAAATTATGCGGCTGGGTGTGAAACATTGGTGTCAAACATTGTGATGGGGATGACGGTGTTGATATCACTGCAGTTTTTGACAAGGCTATTGTATTATACACCAACGGCTATTCTTGCTTCTGTAATCCTCTCTGCCCTCCCAGGACTCATTGACGTTAGTGAAGCTCACAAAATTTGGAAGGTGGATAAGATTGACTTTCTTGCTTGCGCTGGAGCATTCTTTGGAGTACTCTTTGCTTCTGTCGAGATTGGTCTCATAGTGGCGGTGGTAATATCATTTTCAAAGATCATTCTTATATCAATTCGACCAGGGACAGAAACTCTAGGAAAACTTCCGGGAACTGATTTGTTCTGCGATGTCTATCAGTATCCTATGGCAGTTAAGATTCCCGGGGTTATGATAATACGAGTCAAGTCTGCGTTGCTTTGCTTTGCAAATGCCAATTTCGTTAGAGAAAGGATCATTAAATGGGTCACTGAGGAAGAATCAGAATTAGCCATTGCAAACCCCAGGTGGCAAGTGATACACAAGCTAAAGGTGTCCAACTTTGTCGGCAAAATCGGTGGCAGAGTCTTTCTGACTGTTGAAGAAGCTGTTGGTTGCAAGAGCCGCTGCTAA 1845 0.4428 MASSAMETCKSADTMMQLQVDIEKNVAQDQDVRSQWVLNAPDPPSPWRVVADSVSKTISHYKHKFSSLTDQPCSTLLLSLLQLLFPILAWGRNYTATKFRKDLLAGLTIASLCIPQSIGYATLAHLDPQYGLYTSVVPPLIYAVMGTSREIAIGPVAVVSLLLSSMMEKLVDPAADPVAYTKLILLATLFAGIFQTSFGLFRLGFLVDFLSHAAIVGFVAGAAIVIGLQQLKGLLGITHFTTKTDIVSVIKAVWEEVHNPWNPRNFILGCSFLVFILTTRFLGKRKKKLFWLASISPLISVVVSTLIVFLTRADKNGVKIVKHVKGGLNPSSIHQLDFNSPYIGEVAKIGLVVAVVALTESIAVGRSFASIKGYQLDGNKEMISIGITNIIGSFTSCYVATGSFSRTAVNYAAGCETLVSNIVMGMTVLISLQFLTRLLYYTPTAILASVILSALPGLIDVSEAHKIWKVDKIDFLACAGAFFGVLFASVEIGLIVAVVISFSKIILISIRPGTETLGKLPGTDLFCDVYQYPMAVKIPGVMIIRVKSALLCFANANFVRERIIKWVTEEESELAIANPRWQVIHKLKVSNFVGKIGGRVFLTVEEAVGCKSRC 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1973 614 Pfam STAS domain 532 571 IPR002645 -
Aed7g1973 614 PANTHER LOW AFFINITY SULFATE TRANSPORTER 3-LIKE 24 572 - -
Aed7g1973 614 PANTHER LOW AFFINITY SULFATE TRANSPORTER 3-LIKE 571 609 - -
Aed7g1973 614 Gene3D STAS domain 511 574 IPR036513 -
Aed7g1973 614 PANTHER SULFATE TRANSPORTER 571 609 IPR001902 GO:0015301|GO:0016020|GO:0055085
Aed7g1973 614 PANTHER SULFATE TRANSPORTER 24 572 IPR001902 GO:0015301|GO:0016020|GO:0055085
Aed7g1973 614 Pfam Sulfate permease family 99 479 IPR011547 GO:0016021
Aed7g1973 614 TIGRFAM sulP: sulfate permease 86 584 IPR001902 GO:0015301|GO:0016020|GO:0055085
Aed7g1973 614 ProSitePatterns SLC26A transporters signature. 128 149 IPR018045 GO:0008271|GO:0008272
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1973 Aed-Chr7 22666211 22671544 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1973 25 608 Inorganic Solute Cotransporters AT5G10180 65.660 0.0 845
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1973 K17469 - gmx:100817831 1092.8