Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1972 ATGGTTGCTTCAAACAAAACGGCGTCGTTAGAAGAGGTTTTGGACATTGAGAAGAACATGAATCAGTGGGTAGTGAATCCTCCAGAGCCACCTTCCATGCTGCGTCAGGTGGTGGAGAACGTGAAGGGCACCCTCTTACCGCATCCAAATCCAAACACCTTCTATTCTCTCAGGAACAAGCCCTTTTCCAAACGTTCATTTGCCTTGTTGCACAACTTGTTTCCCATTCTTTCTTCACTCCAAAACTACAATGCCCAAAAGCTCAAGTGCGATTTCATGGCCGGTCTAACCCTTGCAATCTTCGCCATTCCTCAGTGTATGGGAAATGCGACATTGGCGCAGCTAAATCCTGAATATGGCCTATATACAGGAATAGTCCCACCTCTAATTTATGCGATGCTGGCGAGTTCAAGGGAGATAGTGATCGGACCTGGATCTGTGGATTCAATGCTTCTTTCGTCAATGATTCAGACATTGAAAGTTGCTTCTATTCATGATTCTATTACTTACATTCAACTTGTTTTCACTGTTACCTTTTTTGCGGGCATCTTTCAAGTTGCTTTCGGCTTCTTTAGGCTTGGTTTTCTGGTGGAATATCTTTCACAAGCCACGATCGTGGGGTTCTTGGCAGCAGCTGCCGTGGGCATTGGACTACAACAATTGAAAGGGTTATTTGGGATCGTTAACTTTACCAATAAAGCTTCTTTATTTTCCGTGGTCAAATCTCTTTCGACATCCTTCAAAAACCAATCAGCGTGGCATCCCTACAATTTTATTATTGGATTCTCATTTCTCTGTTTCATCCTATTTACCAGATTCCTGGGGAAAAGGCACAAGAAACTCATGTGGTTGTCACATGTTGCTCCTCTCCTTTCTGTTGTTGTATCCTCTGGATCTATTGCTGTTGGGCGATCATATGCATCTCTAAAAGGACATAGTATTGATCCCAACAGAGAAGTGGTATCCTTGGGCATAATGAACATTGTTGGATCCTTAACTTCTTGCTATATTGCATCAGGTTCAGTGTCACGTACTGCTGTGAACTACAATGCTGGGTCGGAAACAATGGTGTCGAACGTAGTGATGGCACTGACGGTGCTGATGTCACTTAAATTTCTGAAGGGGCTATTATATTTCACTCCCAAAGCAATCCTAGCAGCAATAATTCTTTCGGCCGTACCAGGACTCATTGACCTTAACAAAGCACGTGAAATTTTGAAGGTTGATAAAATGGATTTCCTTGCTTGCACTGGAGCCTTTTTCGGAGTCTTGTTTGCATCTGCCGAAATAGGCCTTGCAATTGGGATCACGATATCATTTGCCAAGATAATTATAAGCTCGATTCAACCTGCAATAGCGGTTATTGGAAGGCTTCCAGGAACGGATGCATTCGGCGATGTTGAACAATATCCAATGGCTGTCAACATTCCTGGGGTTTTGATCCTCTCTTTAAAATCTGCTTGGCTTTGTTTTGCTAATGCAAATCTTGTAGAGGAAAGGATTGAGAGATGGGTGAATAATGGAAAAGCTAAGGATGGCAAAGGAGGACAAAGCACCTTCGTACACGTCATTATTGATGCCTCAAGTCTTACGAATATTGACACCGCGGGAATTGCTTCTCTGGTGGAGCTCAACAAAAATCTGACTTCAGGTGGAGTTAAGTTAGCCATCGCTAACCCTAAGTGGCATGTAATTCACAAGCTAAGATTAGCTAATTTCGTGAGCAAAATTGGAGGAAGGGTTTTTCTTTCAGTGGGAGAAGCAGTAGATGCATGTGTTGGCACTAAAATGGTTGCATGTGTTGGGACTAAAATGGTTGCTGTATAA 1827 0.4291 MVASNKTASLEEVLDIEKNMNQWVVNPPEPPSMLRQVVENVKGTLLPHPNPNTFYSLRNKPFSKRSFALLHNLFPILSSLQNYNAQKLKCDFMAGLTLAIFAIPQCMGNATLAQLNPEYGLYTGIVPPLIYAMLASSREIVIGPGSVDSMLLSSMIQTLKVASIHDSITYIQLVFTVTFFAGIFQVAFGFFRLGFLVEYLSQATIVGFLAAAAVGIGLQQLKGLFGIVNFTNKASLFSVVKSLSTSFKNQSAWHPYNFIIGFSFLCFILFTRFLGKRHKKLMWLSHVAPLLSVVVSSGSIAVGRSYASLKGHSIDPNREVVSLGIMNIVGSLTSCYIASGSVSRTAVNYNAGSETMVSNVVMALTVLMSLKFLKGLLYFTPKAILAAIILSAVPGLIDLNKAREILKVDKMDFLACTGAFFGVLFASAEIGLAIGITISFAKIIISSIQPAIAVIGRLPGTDAFGDVEQYPMAVNIPGVLILSLKSAWLCFANANLVEERIERWVNNGKAKDGKGGQSTFVHVIIDASSLTNIDTAGIASLVELNKNLTSGGVKLAIANPKWHVIHKLRLANFVSKIGGRVFLSVGEAVDACVGTKMVACVGTKMVAV 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1972 608 Pfam STAS domain 470 588 IPR002645 -
Aed7g1972 608 Pfam Sulfate permease family 299 417 IPR011547 GO:0016021
Aed7g1972 608 Pfam Sulfate permease family 88 296 IPR011547 GO:0016021
Aed7g1972 608 ProSiteProfiles STAS domain profile. 489 592 IPR002645 -
Aed7g1972 608 CDD STAS_SulP_like_sulfate_transporter 470 583 - -
Aed7g1972 608 PANTHER SULFATE TRANSPORTER 11 297 IPR001902 GO:0015301|GO:0016020|GO:0055085
Aed7g1972 608 PANTHER EARLY NODULIN-70 297 599 - -
Aed7g1972 608 PANTHER EARLY NODULIN-70 11 297 - -
Aed7g1972 608 SUPERFAMILY SpoIIaa-like 476 592 IPR036513 -
Aed7g1972 608 ProSitePatterns SLC26A transporters signature. 117 138 IPR018045 GO:0008271|GO:0008272
Aed7g1972 608 Gene3D STAS domain 449 594 IPR036513 -
Aed7g1972 608 PANTHER SULFATE TRANSPORTER 297 599 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1972 Aed-Chr7 22658437 22663226 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1972 1 597 Inorganic Solute Cotransporters AT5G10180 48.392 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1972 K17469 - zju:107425432 602.438