Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1966 ATGACGCAGCAGAATGTGGCAGTGTCTGATACTGATAGTACTGAATCAGGAGTGTCCTTAACAGTTTTCCCAACAACAACGCAAAAGCCACCGGCGGCGCAAGGAGGGTACATTTCCATTTCACGGAGGAGGGTTCTGAAGAACCTTGAGATCAATGGAGGCCAAAGAATCAATGCATGGGTTGAGTCTATGAGATCCTCCTCTCCAACCCATCTTAAATCCACCCCTTCTTTGTCTCAGGACCATAACTCTTGGATTCTTCACCATCCGTCAGCATTAGACATGTTTGACCAAATCATTGACGCGTCAAATGGAAAACAAATTGTCATGTTTCTGGACTATGATGGCACGCTGTCCCCTATAGTCGATGATCCTGACCGTGCTTTCATGTCCGATTCGATGAGAAAAACAGTGAGGAAAGTTGCTAGGTGTTTCCCTACTGCTATAGTGACCGGCAGATGCAAAGACAAGGTGTACAATTTTGTTCGCTTGGCTGAGCTATACTATGCAGGAAGCCATGGCATGGATATTAAAGGACCAACAAGAAGCTCCAAATACAACAAAGATAGCAAAGCTGATGCAATTCTTTTTCAACCTGCCAGTGATTTTCTTCCCGTGATAGAGGAGGTGTATCAACAATTAGTTGAAAAGACAAAATCAACTCCCGGAGCTCTGGTTGAGAACAACAAGTTCTGCCTCTCTGTTCATTTTCGTTGTGTTGATGAGAAGAAATGGAGTGAACTGGCACGCCAAGTGAAATCAGTTTTAAAGGAGTACCCGAAGCTTCGACTTACCCAAGGAAGAAAGGTGCTAGAGATTCGTCCCACTATTAAATGGGACAAAGGGAAGGCCTTGGAATTTTTATTAGAGTCACTTGGCTTGGCCAATTGTAGTGATGTCTTTCCTGTTTATATTGGCGATGATCGATCTGATGAAGATGCTTTCAAGAAATTAAGAGACAGAGGACAAGGTTTTGGCATTCTTGTCTCCAAATTTCCGAAAGACACAAGTGCATCTTACTCTTTACAAGAACCCAACGAGGCAAGGAGAATTATTATTTTTTACTTCATCTATTTTTGCACCATTGTGATGAACTTTCTTCAACGCTTGGTGGAGTGGAAACATGTATCCCTGCGAGCACGTTCCCGGGTGTAA 1155 0.4338 MTQQNVAVSDTDSTESGVSLTVFPTTTQKPPAAQGGYISISRRRVLKNLEINGGQRINAWVESMRSSSPTHLKSTPSLSQDHNSWILHHPSALDMFDQIIDASNGKQIVMFLDYDGTLSPIVDDPDRAFMSDSMRKTVRKVARCFPTAIVTGRCKDKVYNFVRLAELYYAGSHGMDIKGPTRSSKYNKDSKADAILFQPASDFLPVIEEVYQQLVEKTKSTPGALVENNKFCLSVHFRCVDEKKWSELARQVKSVLKEYPKLRLTQGRKVLEIRPTIKWDKGKALEFLLESLGLANCSDVFPVYIGDDRSDEDAFKKLRDRGQGFGILVSKFPKDTSASYSLQEPNEARRIIIFYFIYFCTIVMNFLQRLVEWKHVSLRARSRV 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1966 384 Gene3D - 190 276 - -
Aed7g1966 384 CDD HAD_TPP 109 350 - -
Aed7g1966 384 Gene3D - 110 342 IPR023214 -
Aed7g1966 384 MobiDBLite consensus disorder prediction 1 26 - -
Aed7g1966 384 TIGRFAM T6PP: trehalose-phosphatase 106 348 IPR003337 GO:0003824|GO:0005992
Aed7g1966 384 SUPERFAMILY HAD-like 109 355 IPR036412 -
Aed7g1966 384 Pfam Trehalose-phosphatase 111 345 IPR003337 GO:0003824|GO:0005992
Aed7g1966 384 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 384 IPR044651 GO:0004805|GO:0005992
Aed7g1966 384 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 384 - -
Aed7g1966 384 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 110 321 IPR006379 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1966 Aed-Chr7 22612533 22614947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1966 110 318 Trehalose Biosynthesis Gene Families AT1G60140 29.091 3.97e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1966 K01087 - gmx:100815357 687.182