Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1925 ATGGGTCTCTCAAATTTCCCAAGTGCATCTGAAGGGGTGCTACCTGTGCTTGTGATAAACACGGTTCTCTCAGTGGCTTTTTTGAAGAACATGTTTAGATCCATGCTCCAACTAGTTTGTGGCAGTACTGCTACTAGTACTCCAAATGATGATGAAATTAGTTGTTGTTCTTCACGCGAAAGGAGAGTGTCAATAACTCAGTACAAGTCATTGTGCCACGACCACGACATGGGAATAGGAATGGCTATGTCGACTATGGTGGAGTGGTGCTGCGTTTGTTTGTGTCGTTTTGAAGCCAATCAAGAGGTCAGCGAGTTGCCTTGCAAGCATTACTTCCACAAAGGTTGCTTAGACAAATGGTTTCAGTTTGACAACAAACACACCACTTGCCCCTTGTGTCGTTCCATGGACTAG 414 0.4469 MGLSNFPSASEGVLPVLVINTVLSVAFLKNMFRSMLQLVCGSTATSTPNDDEISCCSSRERRVSITQYKSLCHDHDMGIGMAMSTMVEWCCVCLCRFEANQEVSELPCKHYFHKGCLDKWFQFDNKHTTCPLCRSMD 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1925 137 SUPERFAMILY RING/U-box 89 135 - -
Aed7g1925 137 ProSiteProfiles Zinc finger RING-type profile. 90 134 IPR001841 -
Aed7g1925 137 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 81 137 IPR013083 -
Aed7g1925 137 PANTHER F21J9.24-RELATED 1 136 - -
Aed7g1925 137 Pfam Ring finger domain 90 134 IPR001841 -
Aed7g1925 137 PANTHER - 1 136 IPR044249 -
Aed7g1925 137 SMART ring_2 90 133 IPR001841 -
Aed7g1925 137 SMART ringv_2 89 134 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1925 Aed-Chr7 22318312 22318725 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1925 1 135 C3H Transcription Factor Family AT2G04240 32.051 3.66e-17 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1925 K16285 - gmx:100527069 213.386