Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1911 ATGACAATGCTTGTTCTTGGCAGTTTGATAAATGATTATGCTGGTGGATCTGGACATAATTCTGTCTCCAACCATCTTATAGACAAGTACGCTCTAAGGCTGCTAGGTGTTGCTATTGGGGTTGCTTTATCCTCCTTTATAGAAGGTGTATGTTGGACAAGAATTGCAGAGAGACAAACTTCCCGCATGAGAACTGAATATCTCAAATCAGTCCTAAGGCAAGAAGTTGGTTTCTTCGACAAGCAAACTGACTCATCTTCCACAACTTTCCAAGTTATTGCCACCATAACTTCTGATGCTCAAACAATCCAAGATACCATAGCTGATAAGGTGCCTAATTGTCTTGGTCACCTCTCAGCATTTTTCTCTAGCTTTATAGTGGCACTCTTCCTTTCATGGAGACTTGCACTAGCTGCTTTTCCATTTTCAATCATAATGATCATGCCAGCTATCATATTTGGGAAGACCATGAAAGAGTTGGGAAGTAAAATGAAGGATGCATATGGAGTTGCTGGCAGCATTGCTGAACAAGCAATCTCATCAATTCGCACTGTCTATTCATATGTAGGTGAGAAGCAAACACTAGAAGCGTTCAACTCAGGTCTTCAGAAAAGTAAGGAGATTGGCATTAAACTAGGTCAGACCAAGGGAGTGATTATTGGTAGCTTTGGGTTGCTATATGCTACTTGGGCATTCCAATCTTGGGTTGGTAGTGTTTTAGTCAGGACTAAAGGAGAAAGTGGTGGCCCTGTGTTTTGTGCTGAAATATGCATCATTTGGGGAGGACTGTCTCTGATGAGTGCACTACCAAATCTTGGTTTCATATTAGAGGCAACAACAGCTACTACCCGGATTTTTGAGATGATCGACAGAGTGCTAAGCATAAATTCTTATAAAGAAAAAGGAAAGGTGTTAACACATGCAAGAGGAGAGATCACAATTAATGATGTTGAGTTTAGTTACCCATCAAGGCCAGATGCACCGGTTCTCCAAGGACTCAATATGAAAGTGCAGGCAGGGAAAACAGTAGGCCTAGTTGGAGGGAGTGGCTCTGGCAAATCTACTATCATCTCTTTGCTTGAAAGATTTTATGATCCTGTGTATGGTGAGATATTGCTTGATGGATATGATATACAGACACTCCACGTTAAGTGGTTAAGGTCCCAGATGGGACTGGTAAATCAGGAGCCAATTCTCTTTGCAACTTCCATTAGGGAGAACATTCTATTTGGCAAGGAAGGAGCTTCAATGGAAGCTGTTATAAAAGCAGCAAAGGCAGCAAATGCACATGATTTCATTGTCAAACTTCCTAATGGATATGAAACTCAATTGTCTGGAGGGCAAAAGCAAAGGATTGCCATTGCAAGGGCATTAATAAGAGAACCAAAAATCCTACTACTTGATGAAGCCACAAGTGCTTTGGATTCACAGTCCGAAAGACTAGTGCAAGATGCTCTCGATAAGGCTTCTAGAGGCAGGACAACAATCATCATAGCGCATCGCCTATCCACAATTCGTAAGGCTGATTCAATAGTAGTTCTTCAATCAGGAAGAGTGGTTGAATGTGGTTCCCATGATGAACTACTCCAACTGAATAATGGACAAGGAGGGAGTTACAGCAAAATGCTACAACTGCAACAAGCAACAAGCCAAGACGAAAATGCATTGCATCAAATAAACAAGAGCCCTTTGGCTATGGTAAATCAAACAAGTCCAATGTTTAGCAGGCAAAGTAGTCCAATTCATCATGCATTCAGCTCAACACAACCGTTTAGTGCCGTATACTCAATCAGTGTTGCAGGGTCCAGCTTTGATGACTACAGCAGTGAAAACTGGGAGAAATCTTCAAATGCAAGCTTCTCTCAATGGCGTTTACTAAGAATGAATGCCCCGGAGTGGAAACATGCATTGCTTGGGTGTTTAGGGGCCATTGGCTCTGGAATATGTCAGCCAATTTACTCCTATTGCTTGGGAATAGTTGCATCTGTCTACTTTATAAAGGACAACTCTCTCATCAAATCAGAAATCAGGTTGTACTCGTCCATCTTCTGCGGCATAGCTGTTGTCAACTTCATTTCAGGCCTCATTCAACATTACAATTTCACCATTATGGGAGAGAGTTTGCTGAAGAGGGTGCGAGAAAATTTGCTAGAGAAGGTGCTGACTTTTGAGATGGGATGGTTTGACCAAGAGGATAACAGCAGTGCAGCAATTTGTGCTCGTTTGGCAACTGAAGCCAACTTGGTTAGATCCCTTGTTGCAGAAAGAATGTCACTGTTAGTTAATGTTTCTGTTATGGCTTTCTTGGCTTTTGTACTAAGTTTAACTGTCACATGGAGGGTGGCTCTTGTCATGATGGCAATGCAGCCATTGATCATTGTATGTTTCTACTCAAAAAACATTCTCATGAAAAGTATGGCAGGGAAAGCAAGAAAGGCTCAAAGAGAGGGTAGTCAATTAGCAATGGAAGCTACTACCAATCACAGGACTATTGCTGCATTCTCATCTGAGAAGAGGATTTTAAATTTGTTCAAAACTGCTATGAAAGGCCCCAAGGAGGAAAGCATCAAGCAATCATGGATTTCAGGTTTCATATTGTCAGCTTCATATTTTGTAACAACAGCATCTATAACTTTGACTTTTTGGTATGGAGGCCGGTTATTGAATCAAGGGCTGGTGGAATCAAAACCTCTTTTGCAAGTTTTCCTCATTTTGATGGGCACTGGTAGACAAATTGCAGAGACAGCAAGCACAACTTCTGACATGGCTAAGAGTGGAAGAGCCATTAGTTCAGTATTTGCAATACTGGATAGGAAAAGTGAGATTGAACCGGAAGATCCTAGACATAAAAAGCTCAGAAACAATATGAAAGGCTATATAAAACTAAAAGATGTCTTTTTTTCATACCCAGCAAGGCCAGATCAAATGATTCTCAAGGGCCTAAGTCTTGATATCGAAGCTGGCAAAACAGTTGCATTAGTGGGACAAAGTGGCTCCGGAAAATCCACTATCATTGGCTTAATTGAAAGATTTTATGACCCCATGAAGGGATCCATATCCATAGACAATTGTGATATCAGGGAATTTAACTTGAAAAGTTTGAGATCACATATTGCCTTGGTGAGTCAGGAGCCAACCCTGTTTGCAGGAACTATACGTGAAAACATTGTGTATGGCAAAAAGGATGCATCAGAAGATGAAATAAGAAAGGCAGCACGAGTGCAGCTGTCAGGAGGACAGAAGCAGAGGATAGCAATTGCTCGAGCAGTACTTAAGGACCCTTCAATCCTTCTGTTGGATGAGGCAACAAGTGCTCTTGACAGCGTGTCAGAGAATCTAGTACAGGAGGCACTCGAGAAAATGATGGTTGGAAGAACGAGTGTAGTTATAGCTCACCGATTGTCGACAATACAAAGTGTTGATTCCATAGCTGTGATTCAAAATGGGAAGGTTGTGGAACAAGGGTCGCATTCACAGTTATTGAGCATGAGATCAAATGGAGCTTATTACAACTTGATTAAGCTACAGCATGGCCACTCAACTTGA 3546 0.4151 MTMLVLGSLINDYAGGSGHNSVSNHLIDKYALRLLGVAIGVALSSFIEGVCWTRIAERQTSRMRTEYLKSVLRQEVGFFDKQTDSSSTTFQVIATITSDAQTIQDTIADKVPNCLGHLSAFFSSFIVALFLSWRLALAAFPFSIIMIMPAIIFGKTMKELGSKMKDAYGVAGSIAEQAISSIRTVYSYVGEKQTLEAFNSGLQKSKEIGIKLGQTKGVIIGSFGLLYATWAFQSWVGSVLVRTKGESGGPVFCAEICIIWGGLSLMSALPNLGFILEATTATTRIFEMIDRVLSINSYKEKGKVLTHARGEITINDVEFSYPSRPDAPVLQGLNMKVQAGKTVGLVGGSGSGKSTIISLLERFYDPVYGEILLDGYDIQTLHVKWLRSQMGLVNQEPILFATSIRENILFGKEGASMEAVIKAAKAANAHDFIVKLPNGYETQLSGGQKQRIAIARALIREPKILLLDEATSALDSQSERLVQDALDKASRGRTTIIIAHRLSTIRKADSIVVLQSGRVVECGSHDELLQLNNGQGGSYSKMLQLQQATSQDENALHQINKSPLAMVNQTSPMFSRQSSPIHHAFSSTQPFSAVYSISVAGSSFDDYSSENWEKSSNASFSQWRLLRMNAPEWKHALLGCLGAIGSGICQPIYSYCLGIVASVYFIKDNSLIKSEIRLYSSIFCGIAVVNFISGLIQHYNFTIMGESLLKRVRENLLEKVLTFEMGWFDQEDNSSAAICARLATEANLVRSLVAERMSLLVNVSVMAFLAFVLSLTVTWRVALVMMAMQPLIIVCFYSKNILMKSMAGKARKAQREGSQLAMEATTNHRTIAAFSSEKRILNLFKTAMKGPKEESIKQSWISGFILSASYFVTTASITLTFWYGGRLLNQGLVESKPLLQVFLILMGTGRQIAETASTTSDMAKSGRAISSVFAILDRKSEIEPEDPRHKKLRNNMKGYIKLKDVFFSYPARPDQMILKGLSLDIEAGKTVALVGQSGSGKSTIIGLIERFYDPMKGSISIDNCDIREFNLKSLRSHIALVSQEPTLFAGTIRENIVYGKKDASEDEIRKAARVQLSGGQKQRIAIARAVLKDPSILLLDEATSALDSVSENLVQEALEKMMVGRTSVVIAHRLSTIQSVDSIAVIQNGKVVEQGSHSQLLSMRSNGAYYNLIKLQHGHST 1181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1911 1181 SUPERFAMILY ABC transporter transmembrane region 624 944 IPR036640 GO:0005524|GO:0016021
Aed7g1911 1181 CDD ABC_MTABC3_MDL1_MDL2 960 1176 - -
Aed7g1911 1181 CDD ABC_6TM_Pgp_ABCB1_D1_like 1 285 - -
Aed7g1911 1181 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 1 1178 IPR039421 -
Aed7g1911 1181 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 252 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed7g1911 1181 Pfam ABC transporter transmembrane region 2 243 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed7g1911 1181 Pfam ABC transporter transmembrane region 638 903 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed7g1911 1181 SUPERFAMILY ABC transporter transmembrane region 3 290 IPR036640 GO:0005524|GO:0016021
Aed7g1911 1181 ProSitePatterns ABC transporters family signature. 1076 1090 IPR017871 GO:0005524
Aed7g1911 1181 Gene3D - 1075 1177 IPR027417 -
Aed7g1911 1181 Gene3D - 302 547 IPR027417 -
Aed7g1911 1181 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 312 541 IPR003439 GO:0005524
Aed7g1911 1181 CDD ABC_MTABC3_MDL1_MDL2 312 546 - -
Aed7g1911 1181 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 960 1173 IPR003439 GO:0005524
Aed7g1911 1181 Pfam ABC transporter 978 1104 IPR003439 GO:0005524
Aed7g1911 1181 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 952 1176 IPR027417 -
Aed7g1911 1181 CDD ABC_6TM_Pgp_ABCB1_D2_like 626 942 - -
Aed7g1911 1181 SMART AAA_5 339 518 IPR003593 -
Aed7g1911 1181 SMART AAA_5 987 1156 IPR003593 -
Aed7g1911 1181 Pfam ABC transporter 330 472 IPR003439 GO:0005524
Aed7g1911 1181 Gene3D ABC transporter type 1, transmembrane domain 616 926 IPR036640 GO:0005524|GO:0016021
Aed7g1911 1181 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 302 546 IPR027417 -
Aed7g1911 1181 ProSitePatterns ABC transporters family signature. 444 458 IPR017871 GO:0005524
Aed7g1911 1181 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 637 924 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed7g1911 1181 Gene3D - 946 1074 IPR027417 -
Aed7g1911 1181 Gene3D ABC transporter type 1, transmembrane domain 24 570 IPR036640 GO:0005524|GO:0016021
Aed7g1911 1181 PANTHER OS04G0481700 PROTEIN 1 1178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1911 Aed-Chr7 22178225 22183685 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1911 27 549 Calmodulin-binding Proteins AT2G36910 36.920 4.75e-98 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1911 K05658 - gmx:100804664 2112.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g1911 7 22178225 22183685 Aed7g1911 7 22178225 22183685 ECH