Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1910 ATGGGAGAAACCGGTGTGATTGTCCGGTTCCCGGGTAGCTTAGACCCGAGAGCAGAGGAGTTCAGACCCAATCCCATCAATATTCAATGCCAATGGTACTCTCTTCCTCCTCCTCACCTCTCCTCCTCCTCCACTCGCTCCCTCCTCCTCACCCCGGTCCCCCTCACCTCCGACTCCGCCCTCCGCGCAGAACTCCTCCCCTTCGGCGAAATCAGAGCCCTCCAAACCGAAGCCCTCCGCCACGGCATCCTCACCGTCCACTTCTTCGACCTCCGCCATGCAGAGTCCGCCTTCACCGCCATCCGCTCCATGCACCTTCACTTCCCTCCCTTCCTCTCCTCCCGCCCCATCTCCGCCCACTACGTCCTCCCTTCCTCCAACGCCCTCCCCGACGCCCACAACCAAGGCACCCTCGTCATCTTCAACCTCGACCCCAACCTCTCCACACACCAACTCCGTCAACTCTTCCAGCCTTTCGGTCCCATAAAGGAATTGAGAGATACCCCATGGAAAAAGAACCAAAGATTCGTGGAGTTCTTCGACATTCGAGACGCTGCCAACGCCTTGCAACACATGAACGGCAAAGATATTCACGGCAAACAACTTGTCATCGAGTTCAGTAGACCCGGTGGTCACACCCGCAAGTTCTTCCACCCTCCACCTCCTCCTTCTCTCAATTTCAATGCTGTTCCACCCATTCCTCCTCCTTCCCCACGACATCGTTTTCCTCCTGCTCCTCGCTTGCATTCCTCTCTATCACCGGCAAGCCCCAACAGGAGTATGGGATCTGTTGATGCGGCAATGAGTTTGACCGGAGACGGGGTTGAAGTTGAAGAGCAGCAGCAGCATTCACATGGCCCCACACGGAGGAATCTTGGCAGAAAGCACAATTGCGAGGCCACAACACTCACCAAGCAGCAGCAGCAGCAACAAGTACCTAGAAGTAGGCACTGGAAGGGAAAACAAGCAAAGAAACACGAAACACGCTTTCTAATCAAAGAGGATGCCATTGTAGAATCGGAATCTGCTGCCCCCAAAGACACTAGAACTACTGTCATGATAAAAAACATTCCCAACAAGTACAGTCAGAAGTTGCTATTAAACATGCTGGATAACCACTGCATACACTGCAACGAGCAGATTGCAGACGGCGATGACCAGCAGCCTCTATCCTCTTACGACTTCCTCTACCTTCCCATTGATTTCAACAATAAGTGCAACGTGGGATATGGGTTTGTGAACATGACATCGCCGGAGGCAACACTCAGGCTCTACAAGGCCTTCCATCTTCAACATTGGGAGGTTTTCAATTCAAGAAAAATCTGTCAAGTCACTTATGCTAGAGTTCAGGGTTTGGAAGCATTGAAAGAGCACTTTAAGAATTCAAAGTTCCCATGCGAGATGGATCATTATTTGCCAGTGGTGTTTTCGCCGCCTCGAGATGGGAGGGAACTGACGGAGCCACTTCCTATAGTGGGGAACAAGCAACAGCAGCAAGCCATTCCAATCTCAAGTGGCGGTGATGACGTGGCTAGCAGCAAAAGCGGCGGCGGCGTAGGTGATGATGAGACAAATGAAGAAGAAGTGGGTGGAGCTAGTAAGTTCTGA 1608 0.5243 MGETGVIVRFPGSLDPRAEEFRPNPINIQCQWYSLPPPHLSSSSTRSLLLTPVPLTSDSALRAELLPFGEIRALQTEALRHGILTVHFFDLRHAESAFTAIRSMHLHFPPFLSSRPISAHYVLPSSNALPDAHNQGTLVIFNLDPNLSTHQLRQLFQPFGPIKELRDTPWKKNQRFVEFFDIRDAANALQHMNGKDIHGKQLVIEFSRPGGHTRKFFHPPPPPSLNFNAVPPIPPPSPRHRFPPAPRLHSSLSPASPNRSMGSVDAAMSLTGDGVEVEEQQQHSHGPTRRNLGRKHNCEATTLTKQQQQQQVPRSRHWKGKQAKKHETRFLIKEDAIVESESAAPKDTRTTVMIKNIPNKYSQKLLLNMLDNHCIHCNEQIADGDDQQPLSSYDFLYLPIDFNNKCNVGYGFVNMTSPEATLRLYKAFHLQHWEVFNSRKICQVTYARVQGLEALKEHFKNSKFPCEMDHYLPVVFSPPRDGRELTEPLPIVGNKQQQQAIPISSGGDDVASSKSGGGVGDDETNEEEVGGASKF 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1910 535 Gene3D - 293 456 IPR012677 -
Aed7g1910 535 SMART rrm1_1 137 205 IPR000504 GO:0003723
Aed7g1910 535 PANTHER RNA BINDING PROTEIN 32 521 - -
Aed7g1910 535 PANTHER TERMINAL EAR1-LIKE 1 32 521 - -
Aed7g1910 535 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 138 202 IPR000504 GO:0003723
Aed7g1910 535 MobiDBLite consensus disorder prediction 251 265 - -
Aed7g1910 535 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 136 209 IPR000504 GO:0003723
Aed7g1910 535 MobiDBLite consensus disorder prediction 491 511 - -
Aed7g1910 535 MobiDBLite consensus disorder prediction 215 243 - -
Aed7g1910 535 SUPERFAMILY RNA-binding domain, RBD 137 429 IPR035979 GO:0003676
Aed7g1910 535 MobiDBLite consensus disorder prediction 211 325 - -
Aed7g1910 535 MobiDBLite consensus disorder prediction 297 316 - -
Aed7g1910 535 CDD RRM3_EAR1_like 349 451 IPR034458 -
Aed7g1910 535 Pfam RNA recognition motif 2 349 460 IPR007201 -
Aed7g1910 535 Gene3D - 130 215 IPR012677 -
Aed7g1910 535 MobiDBLite consensus disorder prediction 490 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1910 Aed-Chr7 22170967 22173919 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1910 131 208 Eukaryotic Initiation Factors Gene Family AT4G34110 31.707 5.40e-06 47.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g1910 7 22170967 22173919 Aed7g1910 7 22170967 22173919 ECH