Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1893 ATGGGTTCATGTTCTCTCTTTTTTGTTACACTTCTTCTGCTAACATCATCATATGCGGTTTGCCAACTTGAAGGGACAAGTAACTACACTGATAAAAGCACAGGGCTTGCATGGATATCAGATTCTGGGATCATGAAGCATGGCAAGCCAGTGGAGGTACAAAATCCAAGTGGAAACAAGGTTCAGTATAAGAAACGCAGAGAGTTTCCTATAGACAGCAGAAAATACTGTTATACACTTGGCACTGAGGAGAGAAGAAGGTATCTAGTGAGAGCAACATTTCAGTATGGCAGCTTGAATGATGGAGACACATACCCTCAGTTTCAGCTCTATTTGGATGCAACCAAATGGGCTACTGTGTCAATCTACGATGCCTCGAGAATCTATGTGAAGGAAATGATCTTCAGGGCACCCTCTAATTCTATTGATGTTTGCATGTGCTGTGCTACCACTGGCTCTCCCTTCATATCTACCCTTGAGTTGAGGCCCTTGAATGTTTCTATGTATGCCACTGATTTTGAGGGCAGTTTCTTCTTGAAAGTGGCTGCAAGAATCAACTTTGGTGCTCCAAGTGAGGATGCTGTAAGAAATCTGTCAAGAAGGAATCTGAAGGGTGAAATTCCGAGGGAGCTCAACAACATGGAAGCATTGACAGAATTGTGGTTAGATGGCAACATGCTCACAGGACAACTTCCTGACATGAGCAATCTTATCAATCTAAAGATTGTGCATCTAGAGAACAACAAATTGACTGGTCCATTACCATCTTACTTGGGTAGCTTTCCAAGTTTACAAGCACTGTTCATACAGAATAACTCATTTAGTGGGGTAATACCATCAGAATTACTGTCTGGAAAAATCATTTTCAACTTTGATGATAATCCTGAACTACATAAAGGGAACAAGAAGCATTTTCATTTGATGCTTGGAGTTTCTATTGGAGTACTAGTGATTCTATTAGTATTGTTCTTGACAAGTTTGATGCTATTGCTTCATCTGCGTAGAAAGACATCTCAACAGAAACGTGACGAAAAAGGGATTTCTGGACGCAGCAGCACTAGACCTTTAACTGGATACTCATTTGGTCGGGATGGGAATATAATGGATGAAGGTACTGCTTACTATATTACACTCTCAGAGTTGAAAGAAGCTACTAATAATTTTTCAAAGAAAATTGGCAAAGGAAGCTTTGGATCTGTCTACTATGGGAAAATGAAAGACGGAAAAGAGGTTGCAGTTAAGACTATGACTGATCCATCCAGCTATGGGAACCAGCAATTTGTAAATGAGGCAAGATCTTTGATTCGTAAAGGAGATGTGATAAGCATAATGGATCCTTCCATTGTGGGGAATGTGAAAACTGAGTCAGTTTGGAGGGTTGCTGAAATTGCCATGCAATGTGTAGAACAACATGGTGCATGCAGGCCAAGGATGCAAGAGGTCATTTTGGCTATACAAGATGCTTCTAACATTGAAAAAGGGACAGAAAGTCAACTCATTAAGTTATCTTCTTCAGGTGGTTCAAAGCCACAGTCTTCTACTCGTAAGACTTTACTTGCAAGCTTTCTTGAAATTGAGAGCCCTGACTTTTCAAGTTCAAATACTTGCCTCCCCTCAGCCAGATAA 1626 0.4059 MGSCSLFFVTLLLLTSSYAVCQLEGTSNYTDKSTGLAWISDSGIMKHGKPVEVQNPSGNKVQYKKRREFPIDSRKYCYTLGTEERRRYLVRATFQYGSLNDGDTYPQFQLYLDATKWATVSIYDASRIYVKEMIFRAPSNSIDVCMCCATTGSPFISTLELRPLNVSMYATDFEGSFFLKVAARINFGAPSEDAVRNLSRRNLKGEIPRELNNMEALTELWLDGNMLTGQLPDMSNLINLKIVHLENNKLTGPLPSYLGSFPSLQALFIQNNSFSGVIPSELLSGKIIFNFDDNPELHKGNKKHFHLMLGVSIGVLVILLVLFLTSLMLLLHLRRKTSQQKRDEKGISGRSSTRPLTGYSFGRDGNIMDEGTAYYITLSELKEATNNFSKKIGKGSFGSVYYGKMKDGKEVAVKTMTDPSSYGNQQFVNEARSLIRKGDVISIMDPSIVGNVKTESVWRVAEIAMQCVEQHGACRPRMQEVILAIQDASNIEKGTESQLIKLSSSGGSKPQSSTRKTLLASFLEIESPDFSSSNTCLPSAR 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1893 541 SUPERFAMILY Protein kinase-like (PK-like) 374 436 IPR011009 -
Aed7g1893 541 Gene3D Ribonuclease Inhibitor 194 308 IPR032675 -
Aed7g1893 541 PANTHER OS07G0107800 PROTEIN 26 173 - -
Aed7g1893 541 Gene3D Phosphorylase Kinase; domain 1 363 440 - -
Aed7g1893 541 PANTHER OS07G0107800 PROTEIN 431 498 - -
Aed7g1893 541 PANTHER OS07G0107800 PROTEIN 197 433 - -
Aed7g1893 541 ProSitePatterns Protein kinases ATP-binding region signature. 392 414 IPR017441 GO:0005524
Aed7g1893 541 PANTHER OS07G0107800 PROTEIN-RELATED 26 173 - -
Aed7g1893 541 PANTHER OS07G0107800 PROTEIN-RELATED 431 498 - -
Aed7g1893 541 PANTHER OS07G0107800 PROTEIN-RELATED 197 433 - -
Aed7g1893 541 Pfam Malectin-like domain 21 196 IPR024788 -
Aed7g1893 541 SUPERFAMILY L domain-like 196 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1893 Aed-Chr7 22055997 22061806 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1893 325 541 Receptor kinase-like Gene Family AT1G67720 43.578 1.35e-31 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Aed7g1893 Malectin_like 2.2e-49 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1893 - - gmx:100798488 402.134