Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1883 ATGTACTTATCGGAGAAGCCTCGCCCCATCGATTTCTACAAGGAGGAAGGCGCGCGCGATATGATGATCGAGGTGGTCTCCAACGGCGGCGGCGAGCTCCCTCCGCCGCCGCCTCCGTCGATGATGCTCGGCGAGAGCAGCGGCGAGGACCCCGAGGTGGAGATCAAGGCCCCCAAGAAACGCGCGGAGACGTGGGTGCAGGACGAGACGCGGTCACTGATCGGGCTCCGCCGCGAGATGGACGCGCTCTTCAACACGTCGAAGTCGAACAAGCACTTGTGGGAGCAGATATCGGCGAAGATGAGAGAAAAGGGCTTCGATCGTTCTCCCACCATGTGCACCGATAAGTGGCGCAACCTATTGAAGGAGTTCAAGAAAGCCAAGCACCAGGACCGAGGTAGTGGCTCCGCTAAGATGTCATATTATAAGGAGATTGACGAGATCCTCAGAGAGAGGAGCAAGAATGTTCAGTATAAAAGCCCCACTCCTCCGCCTAAGGTATTGACGATACCAGCATCTCTTTTGGGCCTACCAACACTCAATCTTGAGAGAAGTTTGGATCATGATGGACATCCTCTTGCCATTACCACAGCTGATGCTGTTGCAGCAAGTGGAGTCCCTCCTTGGAATTGGAGAGAGACTTCTGGAAATGGTGGAGAAAGTCAGTCATGTTGTGGAAGGGTTATATCAGTTAAATGGGGTGATTATACAAGGCGAATAGGTATTGATGGCACCCCAGAAGCCATCAAAGAGGCAATTAGGGCAGCTTTTAGGTTGAGAACCAAACGTACATTTTGGTTGGAGGATGAAGACCAGATTATCAGAAGTATAGATCGTGAAATGCCTATAGGAAATTACACTCTTCACCTTGATGAAGGAATGGCCATTAAATTACCCCTCTATGATGAGGCTGACCATATTCCTGTGCATACTGAAGATAAGATATTTTACACTGAAGATGATTTCCGTGATTTTCTAACCCGCCGGGGTTGGACAGGTCTGCGGGAATTTGACAGTTATAGAAATATTGACAACATGGATGATCTTCGACCTGGGGCCATATATCGTGGTGTGACTTGA 1080 0.4991 MYLSEKPRPIDFYKEEGARDMMIEVVSNGGGELPPPPPPSMMLGESSGEDPEVEIKAPKKRAETWVQDETRSLIGLRREMDALFNTSKSNKHLWEQISAKMREKGFDRSPTMCTDKWRNLLKEFKKAKHQDRGSGSAKMSYYKEIDEILRERSKNVQYKSPTPPPKVLTIPASLLGLPTLNLERSLDHDGHPLAITTADAVAASGVPPWNWRETSGNGGESQSCCGRVISVKWGDYTRRIGIDGTPEAIKEAIRAAFRLRTKRTFWLEDEDQIIRSIDREMPIGNYTLHLDEGMAIKLPLYDEADHIPVHTEDKIFYTEDDFRDFLTRRGWTGLREFDSYRNIDNMDDLRPGAIYRGVT 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1883 359 Pfam Myb/SANT-like DNA-binding domain 64 148 IPR044822 -
Aed7g1883 359 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-4 5 358 - -
Aed7g1883 359 Gene3D - 65 127 - -
Aed7g1883 359 MobiDBLite consensus disorder prediction 26 50 - -
Aed7g1883 359 CDD GT1 63 128 - -
Aed7g1883 359 ProSiteProfiles Myb-like domain profile. 57 121 IPR001005 -
Aed7g1883 359 PANTHER - 5 358 - -
Aed7g1883 359 SMART sant 61 123 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1883 Aed-Chr7 21986875 21991393 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1883 20 358 Trihelix Transcription Factor Family AT3G25990 63.288 1.45e-158 447
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Aed7g1883 Myb_DNA-bind_4 3.2e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1883 - - gmx:100809497 672.159