Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1871 ATGGCGGCTGGTAAACATGGAGGTTATCGTGACAACGAGTTTAGGGACCGTGACTCCAATTTTAATGTTTCAAGGCGGGATTTTAATAATAATAATAATAATAATTCTACACAAGAGTATGATAGGATTAGGAATGGTAGCCGCGATGTTGTGAGGGTTGGGAGCAAGGATTCAAGAGATAGGGTTAGACTGAGGCTGAATGATATGAGGGAGAGGGAAGCTCCAAAGGGTAGTTACCGGTCATCTTCAAGTAAGAGTGACTCTGGCGGCAGTGGCGGTTGTAGTAGTGGGCTTGGTCCCAGAAGATGTGGGTTTTCTGTTAAGATTATGGATAGAGAGCCAGGTGAGCTTTCTAGTGAGAGTGGGTCTGATGATGATGCTGTTGAATCAGGATCACAGGAAAAACACTGTGAGGTTGCAACAGGTGAAGAAAACGGTGCACGGTCTCCACTAGAGAGGAAAAGAAAATTTTCACCAATAGTATGGGATCAGGATGATAGAGAAATCAATAATTTATCCAAACGTAGGGTTGTCACAGCAGTGACTGCTCTGCCTCCGCATCCAAGAGTCCACCTGTCACCTAATGTTCCTGACAGAGGAGTTAAAATTCGTCCTGTCAAAAACACAGAAGTTGAGATTCTTGAGTTACCAACTGTAGCTAATCCTCCTTTGCTGTCTGAGTCAGATCAGAATGCGGAGTCTGACTCTCGTGTAGGTTTGCATTCATTGTTCCCAGAGCAAAGATGGGGTATTGAGCAGGAAGCCAAGCAATCTGAAGGTGAAGATGATATTCCAACTCATAATATATCATCTTCCAGATGGGCAGCTGGAGATAACTCTTCTGGTGATGAAGGTGAAATCAATGATGAAAAGGAAGTCCTTAAGAGGAGGAAGCTATCTCCTGAGCTGGGTATGAGAGTAAGAAACAAGATGTCAAGAATGGAAGAATCTAAAGTAGAAGATTTTGTAGGAGCTAGAGCCAAATCAAGTGAATTTGAAGAAAGAGGTAGCCATGGGAGATCATCCAGTGGAGATGATCATCCTGGTAATGTGTCAGGAAAGGATGATTATATGGAGATTGATGGTCAAGGTAGCAGAAGTGAAACTAGTGGTTATCATTTGGATACAGATTTAGAAGATGATAGCAGAAAAACCCCTGAACCTTCGGTTCCACCACAAAGAGCTGTCAACATGCTTCAGGGTTGTAGAAGTGTTGATGAGTTTGAGAGACTGAACAAGATAGATGAAGGAACATATGGTGTTGTATTTAGGGCCAAAGATAAGAAGACTGGCAAAATTGTGGCATTGAAAAAGGTGAAGATGGAGAAGGAAAAAGAAGGTTTTCCACTGACATCTCTCAGGGAAATAAACATTCTGCTTTCCTTTCATCACCCATCCATAGTTGATGTTAAAGAAGTAGTGCTTTTAGAAGGTGTGAAGTATCTTCATGACAACTGGGTGCTTCATAGGGATTTGAAGACTTCGAACCTTCTTCTGAATAATAGGGGTGAGTTAAAAATTTGTGATTTTGGATTGGCTCGTCAGTATGGGAGCCCATTGAAACCATATACACACCTGGTGGTTACTCTTTGGTACAGGGCTCCTGAACTTCTTCTGGGGACAAAACAGTATTCAACAGCCATTGACATGTGGTCTCTGGGTTGTATAATGGCTGAGCTATTGTCCAAGGAACCACTGTTTAATGGGAAGACTGAATTTGAACAACTAGACAAGATTTTCAGAATTCTTGGCACACCAAATGAAACAATTTGGCCTGGATTCTCAGAATTACCTCGAGTCAAGGTCAATTTTGTCAAGAATCAGCTTCCAACTCTGGGTGTTTTTGGTCTGGCTATCTGGCCTCTCTTGGTTACTGCTACACAACTTTTTCTAGTTTATATTAACTACCAGAATGTTCCTTTCAGGTATAATCTCCTGCGTAAAAAATTTCCTGCAACATCATTCACTGGATCACCAGTTCCTTCTGATTCTGGATTTGATTTGTTGAACAAGCTTCTTACTTATGACCCTGAAAAGCGGATCATGGCCGAAGAAGCTCTAAACCATGAGTGGTTTTGTGAAGTTCCCCTTCTGAAGTCTAAAGAATTTATGCCTACATTCCCTACTCAACATGCTCAAGATAGGCGAGTGAGGAGAAAATTAAAGAGTCCAGATCCATTAGCTGAGCAGTGCTGGAAGGAGATGCAGCAGGGTGAATCAGGGACTGGTGGTATTTTTGGTTAA 2244 0.4207 MAAGKHGGYRDNEFRDRDSNFNVSRRDFNNNNNNNSTQEYDRIRNGSRDVVRVGSKDSRDRVRLRLNDMREREAPKGSYRSSSSKSDSGGSGGCSSGLGPRRCGFSVKIMDREPGELSSESGSDDDAVESGSQEKHCEVATGEENGARSPLERKRKFSPIVWDQDDREINNLSKRRVVTAVTALPPHPRVHLSPNVPDRGVKIRPVKNTEVEILELPTVANPPLLSESDQNAESDSRVGLHSLFPEQRWGIEQEAKQSEGEDDIPTHNISSSRWAAGDNSSGDEGEINDEKEVLKRRKLSPELGMRVRNKMSRMEESKVEDFVGARAKSSEFEERGSHGRSSSGDDHPGNVSGKDDYMEIDGQGSRSETSGYHLDTDLEDDSRKTPEPSVPPQRAVNMLQGCRSVDEFERLNKIDEGTYGVVFRAKDKKTGKIVALKKVKMEKEKEGFPLTSLREINILLSFHHPSIVDVKEVVLLEGVKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGTKQYSTAIDMWSLGCIMAELLSKEPLFNGKTEFEQLDKIFRILGTPNETIWPGFSELPRVKVNFVKNQLPTLGVFGLAIWPLLVTATQLFLVYINYQNVPFRYNLLRKKFPATSFTGSPVPSDSGFDLLNKLLTYDPEKRIMAEEALNHEWFCEVPLLKSKEFMPTFPTQHAQDRRVRRKLKSPDPLAEQCWKEMQQGESGTGGIFG 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1871 747 PANTHER - 125 474 - -
Aed7g1871 747 MobiDBLite consensus disorder prediction 128 152 - -
Aed7g1871 747 Gene3D Phosphorylase Kinase; domain 1 404 478 - -
Aed7g1871 747 PANTHER - 475 612 - -
Aed7g1871 747 PANTHER - 639 747 - -
Aed7g1871 747 MobiDBLite consensus disorder prediction 113 152 - -
Aed7g1871 747 ProSiteProfiles Protein kinase domain profile. 408 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g1871 747 MobiDBLite consensus disorder prediction 284 342 - -
Aed7g1871 747 MobiDBLite consensus disorder prediction 372 387 - -
Aed7g1871 747 MobiDBLite consensus disorder prediction 1 101 - -
Aed7g1871 747 PANTHER CELL DIVISION PROTEIN KINASE 639 747 - -
Aed7g1871 747 PANTHER CELL DIVISION PROTEIN KINASE 475 612 - -
Aed7g1871 747 SMART serkin_6 408 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g1871 747 MobiDBLite consensus disorder prediction 79 93 - -
Aed7g1871 747 MobiDBLite consensus disorder prediction 264 278 - -
Aed7g1871 747 MobiDBLite consensus disorder prediction 24 41 - -
Aed7g1871 747 ProSitePatterns Serine/Threonine protein kinases active-site signature. 487 499 IPR008271 GO:0004672|GO:0006468
Aed7g1871 747 PANTHER CELL DIVISION PROTEIN KINASE 125 474 - -
Aed7g1871 747 MobiDBLite consensus disorder prediction 251 394 - -
Aed7g1871 747 SUPERFAMILY Protein kinase-like (PK-like) 400 696 IPR011009 -
Aed7g1871 747 Gene3D Transferase(Phosphotransferase) domain 1 479 598 - -
Aed7g1871 747 MobiDBLite consensus disorder prediction 8 23 - -
Aed7g1871 747 Pfam Protein kinase domain 475 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g1871 747 Pfam Protein kinase domain 408 474 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g1871 747 Gene3D Transferase(Phosphotransferase) domain 1 657 692 - -
Aed7g1871 747 MobiDBLite consensus disorder prediction 42 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1871 Aed-Chr7 21908096 21913551 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1871 405 692 Core Cell Cycle Gene Families AT3G48750 39.514 5.92e-70 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Aed7g1871 Pkinase 4.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1871 K08818 - gmx:100793729 1136.32