Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1858 ATGGAGGAGGAAGAAGAAGAGAACGGAGTGTCGATCGAACTGGAATTCCCGAAGGGTCGGGTGAAGAAGATTATGACGCTGGACAAAGACGTGAAGAGAGTGAGCTCAGAAGCATTGTTTCTCGTGTCGCGCTGCACGGAATTATTCCTCCAATTTCTGGCTGAAAAATCAGCTCAGGTTGCAATTGAGAAGAAACGCAAGACCGTGAATCTCGAACACCTAAGAGTGGCCGTGAAGAGGCACCAGCCGACCAGGGATTTTCTTCTCGACGAGCTTCCGCCGCCGTCTCGGCCCGATAAGCCCACTCAGCCTGCAGGTAGGCCCAAATTGGATCCCCCTCCGCGAGGTACTCGCCGCATCGATCAAATCTTCCGGAAACCAGAACCTGAAAGCCCAGCCCAAGACCAAGCCCAACCGCCTGAAAATCCAGACCAAGCCCAAGACCAAGACCAACTGCCTGAAAATCCAGACCAGGACCAAGCCCAATCGCCAGTACCCGTAGATGAGTCTTAG 513 0.5361 MEEEEEENGVSIELEFPKGRVKKIMTLDKDVKRVSSEALFLVSRCTELFLQFLAEKSAQVAIEKKRKTVNLEHLRVAVKRHQPTRDFLLDELPPPSRPDKPTQPAGRPKLDPPPRGTRRIDQIFRKPEPESPAQDQAQPPENPDQAQDQDQLPENPDQDQAQSPVPVDES 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1858 170 SUPERFAMILY Histone-fold 13 81 IPR009072 GO:0046982
Aed7g1858 170 MobiDBLite consensus disorder prediction 94 111 - -
Aed7g1858 170 MobiDBLite consensus disorder prediction 135 170 - -
Aed7g1858 170 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 15 78 IPR003958 -
Aed7g1858 170 PANTHER NUCLEAR FACTOR Y, SUBUNIT C13 3 128 - -
Aed7g1858 170 Gene3D Histone, subunit A 1 93 IPR009072 GO:0046982
Aed7g1858 170 MobiDBLite consensus disorder prediction 112 128 - -
Aed7g1858 170 MobiDBLite consensus disorder prediction 82 170 - -
Aed7g1858 170 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 3 128 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1858 5 131 CCAAT-HAP5 Transcription Factor Family AT5G43250 62.205 1.76e-49 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Aed7g1858 CBFD_NFYB_HMF 2.4e-20 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1858 - - gmx:100790556 285.034