Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1840 ATGTCAAAACTTGGTTCTCGGAGTTTGCGTGATTACAATGCTGCCTTATCAATTCAGAAGAAATATCGAGGCTGGAAAGGTCGCAAAGAATTCTTAGCATTGCGCCAGAAAGTAGTTAAGATACAGGCTTGTCTGAGGGGTTACCGGATTCGGAAGCAATACAAGTTTATATTATGGGCAGTTGGAATCTTGGACAAGGTTGTGCTGCGATGGCGGAGAAAACGAGTTGGTATACAAAGTGTACACCAAGAAATGAATTCAAATGAAGATGAAAGTGATGATGAAGATTTTCTCAACGTGTTCCGAAAAGAGAAAGTAAATGCATCCATTGAAATGGCTTTGAAGCGGGTGCTTTCCATGGTCCATTCTTCAGGTGCTCGTAAGCAATATAAACGCTTACTATCATTGTATCGTCTATCCAAGATTGAACATGGCAGCACAAGCACAAGTGATGAAGCACCGTTATCAACTTTAGGAGATGATGCTTCCAAAATGGAAGACGATGATTTATGTCAATTTTGGGAAACTTTGGGAGAAGATGCTTCCAATATGGAAGACGATGATTTATGTCAATTTTGGGAAACGTTCTGTCCTTTGCCTTCCTAG 606 0.4059 MSKLGSRSLRDYNAALSIQKKYRGWKGRKEFLALRQKVVKIQACLRGYRIRKQYKFILWAVGILDKVVLRWRRKRVGIQSVHQEMNSNEDESDDEDFLNVFRKEKVNASIEMALKRVLSMVHSSGARKQYKRLLSLYRLSKIEHGSTSTSDEAPLSTLGDDASKMEDDDLCQFWETLGEDASNMEDDDLCQFWETFCPLPS 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1840 201 ProSiteProfiles IQ motif profile. 13 40 IPR000048 GO:0005515
Aed7g1840 201 Gene3D - 11 58 - -
Aed7g1840 201 PANTHER CALMODULIN-BINDING PROTEIN 1 177 - -
Aed7g1840 201 ProSiteProfiles IQ motif profile. 34 58 IPR000048 GO:0005515
Aed7g1840 201 SMART iq_5 33 55 IPR000048 GO:0005515
Aed7g1840 201 SMART iq_5 10 32 IPR000048 GO:0005515
Aed7g1840 201 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 1 177 - -
Aed7g1840 201 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 62 IPR027417 -
Aed7g1840 201 Pfam IQ calmodulin-binding motif 36 55 IPR000048 GO:0005515
Aed7g1840 201 Pfam IQ calmodulin-binding motif 13 31 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1840 Aed-Chr7 21703634 21715008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1840 1 149 CAMTA Transcription Factor Family AT1G67310 60.667 6.04e-48 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1840 K21596 - gmx:100787909 281.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g1840 7 21703634 21715008 Aed5g1648 5 20539946 20548465 PCT