Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1835 ATGTGGAGCAAGATATTGAAATCCATAAGGAAAAGTATAGTAAGGCTTCAACAGAAGTGTAGTATGAATAATAATAATTCTGGAAAGAGTGAAGTTGATAGTAGTGTGGCTGTGCAGTGGGAAAATTGCAATTGTTGCATAGAGGAAAGCAAAGAATGCAATTGTGACCACAGTACTGCAGATGGCGCCCTGCAGCGTGATGCTAACGCCAACAGTTCTTTTACTCATGCTGTCATCAACATGGTGGGGATGCTCATAGGTTTGGGGCAACTGTCAACTCCATATGCTGTAGAAAATGGAGGGTGGGCATCAGCATTATTGCTTATAGGACTAGGAGTGATGTGTGCTTACAGTTCTCACATACTTGGAATATGCCTCAGAAAGAATCCCAAGCTAAGAAGCTTCATGGATATTGGGAAGCATGCATTTGGAGCAAAAGGAAGAAACGTGGCTGCAACAATCATCTACATGGAAATCTTCATGTGCCTAGTTTCCTACACCATCTCACTGCATGATAATCTGAACACAGTGTTTATGGGGACAAATTTGAAGCTTCACTTGCCTATGTTTTCTTCGTCCCAGAAGCTCCTAACCGTGGTTGCAGTCTTGATTGCCATGCCTAGTTTGTGGATCAGAGATCTTTCTTCCATATCTTTCCTTTCAAGTTTTGGTATTCTTATGTCACTAGTCATATTCGTGTGTGTAGCAGCCACTGCAGTTTTCGGACATGTCCACTCTTCTAATCATTCCATACCCGTCCTCCACCTCCATAATATTCCATCAGTTTCTGGCCTTTACGTCTTCGGCTATGGAGGACATATTATTTTCCCTGAACTATATACGACCATGAAAGACCCCTCCAAATTTACTAAGGTTTGTATTGTGAGCTTCGCAGTAGTTACAGCAATTTACACGACATTGGGGTTGATGGGTGCGAAGATGTTTGGTAAAGATGTAAAGTCACAGATAACACTGAGCATGGCACCAGAGCAGATATTAACAAAGATTGCTCTCTGGGCAACCGTGGTGACACCAATGACCAAATATGCACTTGAATTCACCCCATTTGCATCTCAACTAGAGCATGCACTTCCAAGTTCCATGGGTGGCAGGACCAAAATGGTAATTAGAGGCTGCGTAGGTTCGTTTTCGCTTTTGGTCATACTAACCCTTGCTCTCTCGGTTCCATATTTTGAGCATGTGCTTAGTCTCACTGGTTCCCTTGTTGGTGTTGCGGTTTGTTTGATTTTGCCATGTGCTTTCTATGTCAAGATATGTTGGGGTCAGATATCGAACACTCTGTTACTTCTGAACCTCTTTCTCATCGTATTCGGCTTTGTTCTTGCCGTCATGGGAACCATTTCCTCCTCACACTTGCTACTCAAAAATCTTCAATTCATCAGCCACTAG 1410 0.4284 MWSKILKSIRKSIVRLQQKCSMNNNNSGKSEVDSSVAVQWENCNCCIEESKECNCDHSTADGALQRDANANSSFTHAVINMVGMLIGLGQLSTPYAVENGGWASALLLIGLGVMCAYSSHILGICLRKNPKLRSFMDIGKHAFGAKGRNVAATIIYMEIFMCLVSYTISLHDNLNTVFMGTNLKLHLPMFSSSQKLLTVVAVLIAMPSLWIRDLSSISFLSSFGILMSLVIFVCVAATAVFGHVHSSNHSIPVLHLHNIPSVSGLYVFGYGGHIIFPELYTTMKDPSKFTKVCIVSFAVVTAIYTTLGLMGAKMFGKDVKSQITLSMAPEQILTKIALWATVVTPMTKYALEFTPFASQLEHALPSSMGGRTKMVIRGCVGSFSLLVILTLALSVPYFEHVLSLTGSLVGVAVCLILPCAFYVKICWGQISNTLLLLNLFLIVFGFVLAVMGTISSSHLLLKNLQFISH 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1835 469 PANTHER OS05G0424000 PROTEIN-RELATED 53 466 - -
Aed7g1835 469 PANTHER AMINO ACID TRANSPORTER AVT1H 53 466 - -
Aed7g1835 469 Pfam Transmembrane amino acid transporter protein 71 454 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1835 Aed-Chr7 21679492 21682684 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1835 43 464 Amino Acid or Auxin Permease AAAP Family AT5G16740 60.377 1.05e-166 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1835 - - gmx:100790897 760.37