Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1794 ATGAAGCTTTCAAGTTTGAAGGTAACGACGAGAGAGATGGGAGAAATAGAAAGTGAGCAGGCAATGCCAAGGTGGGGTGAGAAGGAGGAAGCAGAAGCCCAAATTGAAATCTGGAAGTACATATTTGGGTTTGTGGAACTCGCAGCGGTGAAATGCGCGATTGAGCTCGGCGTAGCTGACGCCATAGAGAACCACGGAAGCCCCATGACACTATCAGAAATATCATCAACTCTAGCCTGCGCCCCTTCACACGTTAACCGCCTCATGAGGTTCCTAGTTCACAGAAAGATATTCAAACGCCACGGCTGCGCCACGTATTCGCAAACACCTCTGTCTCGCCTTCTGATGCGAAGCGGCGAACACAGCATGGCCGCATTCCTCTTGCTGGAGAGCAGCCCCGTGATGCTTGCGCCGTGGCACGGTCTGAGCGCTCGCATCCTGGCCGACGGAAACCCCTCGTTCGCAGAGGCTCACGGCGAGGATGTTTGGCGCTACGCCGCCGCGAATCTGGACCACAGTAACCTCATCAATGAGGCAATGGCGTGCGATGCCAAGCTTGTTATGCCTGTCATCGTTCGCAGCTGCGGCGAGGCGTTTCATGGAATCGAGTCACTGGTGGATGTCGGTGGCGGCAACGGCACCGCCATGCGCATCCTTGCTGAGGCTTGCCCTTGGATTCGGCTCGTCAATTTTGATCTTCCTCATGTCATTGTCAATGCCCCTCCGTGCCATGCCGTGGAACATGTCCCCGGCGACATGTTCGTTAGTGTTCCTAAAGCTGATGCAGTTTTTATCAAGTGGGTTTTGCATGACTGGTCAGACGAGGAGTGCATCGAAATCTTAAAGAAGTGTAGGGAAGCGATCTCAAAGGAAAAGGGAAGGGTTATTATTGTAGAGGCGGTGATTGAGGAAGAAGGAGGGAAGCACGACGGGTTGAAGGATGTAGGGTTGATGCTGGACATGGTAATGATGGCACACACTAACTTCGGCAAAGAGCGCACACTCAAAGAGTGGGAATATGTCATCAAAATGGCGGGATTTACTACTTACACTGTCAAACCTATTCATGCTGTGCAGTCCGTCATTATGGCTTTCAACTAA 1101 0.5213 MKLSSLKVTTREMGEIESEQAMPRWGEKEEAEAQIEIWKYIFGFVELAAVKCAIELGVADAIENHGSPMTLSEISSTLACAPSHVNRLMRFLVHRKIFKRHGCATYSQTPLSRLLMRSGEHSMAAFLLLESSPVMLAPWHGLSARILADGNPSFAEAHGEDVWRYAAANLDHSNLINEAMACDAKLVMPVIVRSCGEAFHGIESLVDVGGGNGTAMRILAEACPWIRLVNFDLPHVIVNAPPCHAVEHVPGDMFVSVPKADAVFIKWVLHDWSDEECIEILKKCREAISKEKGRVIIVEAVIEEEGGKHDGLKDVGLMLDMVMMAHTNFGKERTLKEWEYVIKMAGFTTYTVKPIHAVQSVIMAFN 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1794 366 Gene3D - 22 115 IPR036388 -
Aed7g1794 366 Pfam O-methyltransferase domain 139 347 IPR001077 GO:0008171
Aed7g1794 366 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 38 366 IPR016461 GO:0008168
Aed7g1794 366 PANTHER 3'-HYDROXY-N-METHYL-(S)-COCLAURINE 4'-O-METHYLTRANSFERASE 2-LIKE 28 365 - -
Aed7g1794 366 Gene3D Vaccinia Virus protein VP39 117 365 IPR029063 -
Aed7g1794 366 SUPERFAMILY "Winged helix" DNA-binding domain 28 118 IPR036390 -
Aed7g1794 366 PIRSF O-mtase 15 366 IPR016461 GO:0008168
Aed7g1794 366 Pfam Dimerisation domain 49 93 IPR012967 GO:0046983
Aed7g1794 366 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 120 362 IPR029063 -
Aed7g1794 366 PANTHER O-METHYLTRANSFERASE 28 365 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1794 Aed-Chr7 21396024 21397207 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1794 49 347 Monolignol Biosynthesis Gene Families AT5G54160 36.859 2.06e-62 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1794 K22588 - gmx:100782951 561.222