Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1791 ATGTGCACTCAAATGGTGAATCCCGAGATGGATGTGGAAATCAAATGTCCGTTTTGCCAAAGTGGATTTGCTGAAGAAATGGGTAACAACATTTACAACAATGCATCATCAGAAGCTGATGTTGAATTTGACCGAGCTCTGTCCCTTTGGGCGCCCATCTTGTTAGGCATGATGGACAATCCGCGTTATCACAGAAGACTCAAACAAATAGACGACGATCATGATAGTGATGGTAATGGTAATCACGATGATATTGACCGTGTAGCAGATCACGGTGGAGAAACTGATCACAATCATCAAGAGCTTGAGTCCATCCTTTGGAGGCGGGGGAGAAACTCTGCCACCATTCTACAGTTGCTCCAAGGTATAAGAGCCGGACTGACATCTGGATCATATGAGAATACTACTGATGGCAATGATGACCATGATAGAGAAAGAGAGCGTGTGATCTTGATCAATCCTTTAAACCAGACTATTATTGTTCAAGGTTCTGGTTTGGATATATTGTTGCAACATTTGGCTGAGAATGATCCCAATAGGTATGGAACTCCGCCTGCTCAGATGCAGGCCATCAAGGCGTTGCCTAACATGACAATCAACGAGAATTTGCAGTGTTCTGTGTGTCTGGATGATTTCGAAGTTGGTTCTGAAGCTAAGGAGATGCCTTGTAAACATAAGTTTCATAGCGGCTGTATCGTGCCATGGCTGGAGCTTCATAGTTCGTCTCTAGTTTGCAGGCTTCAATTGCCTATGGCGGATGAATCTAATAAGCAAGACTTTGATGTGCCAAGGGATAGCAGAAGCCTAAGGGAGGATGAAAGTAGTAGTATTAGACATATTGGCAATGCTAAAGAAAGACAGTTAAGGGAGAATTAA 876 0.4326 MCTQMVNPEMDVEIKCPFCQSGFAEEMGNNIYNNASSEADVEFDRALSLWAPILLGMMDNPRYHRRLKQIDDDHDSDGNGNHDDIDRVADHGGETDHNHQELESILWRRGRNSATILQLLQGIRAGLTSGSYENTTDGNDDHDRERERVILINPLNQTIIVQGSGLDILLQHLAENDPNRYGTPPAQMQAIKALPNMTINENLQCSVCLDDFEVGSEAKEMPCKHKFHSGCIVPWLELHSSSLVCRLQLPMADESNKQDFDVPRDSRSLREDESSSIRHIGNAKERQLREN 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1791 291 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 172 252 IPR013083 -
Aed7g1791 291 SUPERFAMILY RING/U-box 194 249 - -
Aed7g1791 291 ProSiteProfiles Zinc finger RING-type profile. 205 245 IPR001841 -
Aed7g1791 291 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 274 - -
Aed7g1791 291 MobiDBLite consensus disorder prediction 70 97 - -
Aed7g1791 291 MobiDBLite consensus disorder prediction 257 291 - -
Aed7g1791 291 Pfam Ring finger domain 204 245 IPR001841 -
Aed7g1791 291 MobiDBLite consensus disorder prediction 255 291 - -
Aed7g1791 291 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 1 274 - -
Aed7g1791 291 SMART ring_2 205 245 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1791 Aed-Chr7 21384923 21385861 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1791 133 258 C3H Transcription Factor Family AT1G26800 40.769 4.79e-26 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1791 K11982 - gmx:100784876 365.155