Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1790 ATGGAAGAAGAAACTGAGTTACAATCTGAAGAAAATAAATTGTCTATGGAGAAAAATAAGAAAAGAAGGCTCAAAACACCTGCCCAGCTTAAGGCCTTGGAAAATTTTTATAATGATAACAAATATCCCACAGAGGAAATGAAATCAGAGCTTGCGGATGAGTTAGAGTTGACAGAAAAGCAAATATCTGGATGGTTTTGCCACAGAAGATTGAAAGATAAAAAAATGTTGAATGATGAAGTATGTGCTAATGGACGACAAGATCGTTCAAGTGGTGTCTTCCAGGATCGCGGCAGCGGTCTAGTGCAGGATTCATGTGGAAGCACTAAACATGTTGATTATAGGTATCTGGATCCCAAAGAGGTTGAGAGTCATGGCCTCTATAACCATGGATTTTTGGCTGCAGATATGACCTATGGAAACAAGAACCATCGCTATACAGAAAATGATAGTGCAACAGATAACACATCATCTGAGAGTTGCTCATCTTTGCAAGACCGATTGCTTCGTCAAGGACAGGATCCGTATGATATGGAGCCTTCTGGTCATCTAACACCTAACGGATCTCTTCCACCCCTCAATACCAAGGGTGCAAATAACATGGGATATAAACCATCAGGATATTTGAAAGTGAAGGGAGAGATAGAACATGCTGCTATTACTGCTGTTAAAAACCAATTAGGAAGGCATTATCTGGAAGATGGTCCACTACTTAGTGTTGAATTTGATGCAATTCCTCCAGAGGCATTTGAATGTCAAAGTGCAGATCTAGCTAATGAAGCATACTATGCTGCAAATCCTGCTCTACCAAATTCTCTAGAAGTCTCTGCTGTGAAAAAACAATCCAGTCTTAGTTCTAGATATGATTCATATTTTGCCAAGTTAAGTTCCCAAGATTCACATATGGAAGGAAGTGACTTTGGCTCCTTGCATGATTCTGGTTTCCTGGATAAGAAACCTCACAAGCATCAAAGACCAACTTTTCACAGTTTTACCAATTCTTTGCCTCTGAAGAGCTCTTCCCTGGATTTGTATGTAGACTCTACTGGGGAAGCATCTGCTTATAATAGCACTAAAAATCACAGAATGGGTACTAAGCATGGTTTTGAGGGGTTGAGATCTGATTTTGCTTCTAACCCTAGTGATCATCATGAAGAGAATAACCTTGCGGTTAAGCAGACAGATTCTTTGCTACATGGCTACGATAACAGCAATCTGAAGAATGTACAAAGGAGTGAATATGTAAAATCTAAGCCTTCAAATTCACTACACAGATCTCAACTTTACTTGGATATTGAAGAAAAAGGGCTTAACAAAAGGATGGCAAAGGAAGAGAAGCTTAATGGGAATAGAAAGTTAAAAAAACAATATCATGATCCAAATGGAGTTAGGGTGCTTTCAAACGAAAAGATGGTTGCAAAGCAAGCTAAAGTTGACCCACTTCAACAATATGATGTTAAACAACCGCCTATTGCTGAGCTAGAACCAAGAAAAAATCAAAGGTCTGTTGCAGAGATGCCATCTAGCTTTAGTGAAGATGAAACTGCAGAAACTAGTTCCTCAGTGGATTAA 1572 0.3906 MEEETELQSEENKLSMEKNKKRRLKTPAQLKALENFYNDNKYPTEEMKSELADELELTEKQISGWFCHRRLKDKKMLNDEVCANGRQDRSSGVFQDRGSGLVQDSCGSTKHVDYRYLDPKEVESHGLYNHGFLAADMTYGNKNHRYTENDSATDNTSSESCSSLQDRLLRQGQDPYDMEPSGHLTPNGSLPPLNTKGANNMGYKPSGYLKVKGEIEHAAITAVKNQLGRHYLEDGPLLSVEFDAIPPEAFECQSADLANEAYYAANPALPNSLEVSAVKKQSSLSSRYDSYFAKLSSQDSHMEGSDFGSLHDSGFLDKKPHKHQRPTFHSFTNSLPLKSSSLDLYVDSTGEASAYNSTKNHRMGTKHGFEGLRSDFASNPSDHHEENNLAVKQTDSLLHGYDNSNLKNVQRSEYVKSKPSNSLHRSQLYLDIEEKGLNKRMAKEEKLNGNRKLKKQYHDPNGVRVLSNEKMVAKQAKVDPLQQYDVKQPPIAELEPRKNQRSVAEMPSSFSEDETAETSSSVD 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1790 523 ProSiteProfiles 'Homeobox' domain profile. 16 76 IPR001356 GO:0003677
Aed7g1790 523 MobiDBLite consensus disorder prediction 1 25 - -
Aed7g1790 523 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 523 - -
Aed7g1790 523 MobiDBLite consensus disorder prediction 502 523 - -
Aed7g1790 523 MobiDBLite consensus disorder prediction 145 201 - -
Aed7g1790 523 MobiDBLite consensus disorder prediction 145 169 - -
Aed7g1790 523 Pfam Homeodomain 20 75 IPR001356 GO:0003677
Aed7g1790 523 Gene3D - 8 91 - -
Aed7g1790 523 CDD homeodomain 20 76 IPR001356 GO:0003677
Aed7g1790 523 MobiDBLite consensus disorder prediction 187 201 - -
Aed7g1790 523 SUPERFAMILY Homeodomain-like 16 79 IPR009057 -
Aed7g1790 523 MobiDBLite consensus disorder prediction 8 23 - -
Aed7g1790 523 MobiDBLite consensus disorder prediction 477 523 - -
Aed7g1790 523 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 523 - -
Aed7g1790 523 SMART HOX_1 18 80 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1790 Aed-Chr7 21377123 21383230 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1790 6 523 Homeobox Transcription Factor Family AT4G03250 39.332 6.65e-77 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Aed7g1790 Homeodomain 3.3e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1790 - - gmx:100812697 889.412