Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1763 ATGGCTTTCTTCCCAGCAAATTTCATGCTACAAACACCTCACCAAGATGAACATCAACCACCACTCAACTCAATTATAACTTCATGTGCACCTCAAGAGTACCATGGAGGAGGATCCTTTCTAGGGAAGAGATCTATGTCATTTTCAGGGATTGAACTTGGAGAAGAAGCTGCTGCTGAGGAAGATTTGTCTGATGATGGATCACAAGCAGGAGAGAAGAAAAGGAGGCTCAACATGGAGCAAGTGAAGACACTCGAGAAGAGCTTTGAGTTGGGAAACAAGCTCGAACCCGAGAGGAAAATGCAGCTTGCAAGAGCTCTTGGCTTGCAGCCTAGACAAATTGCTATATGGTTCCAGAACAGAAGGGCCAGGTGGAAGACCAAGCAGTTGGAGAAGGACTATGATGTTCTCAAAAGACAATATGATGCTATATTGGCACTGAAAAGCAGAGAACCAACTGAATCCATAAACCTTAATAAAGAAACTGAGGGATCAAGCAGCAACAGAAGTGAGAACAGCTCAGAAATCAAGTTGGATATATCAAGAACACCAGCTATTGACAGTCCTCTATCCACTCAGCAGAACAACAACAGCAGAAACCTCTTTCCATCTTCTGCTAGACCAACAGGAGTGGCTCAGCTTTTTCAAACCACTCCAAGGCCAGAGATTCAGTGCCAACAAAAGATTGATCACATGGTCAAAGAAGAGAGCTTGAGCAACATGTTCTGTGGCATTGATGATCAATCTGGCCTTTGGCCTTGGTTGGAGCAGCCGCATTTCAATTGA 786 0.4427 MAFFPANFMLQTPHQDEHQPPLNSIITSCAPQEYHGGGSFLGKRSMSFSGIELGEEAAAEEDLSDDGSQAGEKKRRLNMEQVKTLEKSFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDVLKRQYDAILALKSREPTESINLNKETEGSSSNRSENSSEIKLDISRTPAIDSPLSTQQNNNSRNLFPSSARPTGVAQLFQTTPRPEIQCQQKIDHMVKEESLSNMFCGIDDQSGLWPWLEQPHFN 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1763 261 MobiDBLite consensus disorder prediction 158 207 - -
Aed7g1763 261 MobiDBLite consensus disorder prediction 155 207 - -
Aed7g1763 261 ProSiteProfiles 'Homeobox' domain profile. 68 128 IPR001356 GO:0003677
Aed7g1763 261 PRINTS Lambda-repressor HTH signature 108 124 IPR000047 GO:0003677
Aed7g1763 261 PRINTS Lambda-repressor HTH signature 99 108 IPR000047 GO:0003677
Aed7g1763 261 Pfam Homeobox associated leucine zipper 128 145 IPR003106 GO:0006355|GO:0043565
Aed7g1763 261 Gene3D - 65 134 - -
Aed7g1763 261 SUPERFAMILY Homeodomain-like 66 130 IPR009057 -
Aed7g1763 261 ProSitePatterns 'Homeobox' domain signature. 103 126 IPR017970 GO:0000981|GO:0006355
Aed7g1763 261 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-13 1 261 - -
Aed7g1763 261 Coils Coil 120 140 - -
Aed7g1763 261 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 1 261 IPR045224 GO:0003700
Aed7g1763 261 SMART HOX_1 71 132 IPR001356 GO:0003677
Aed7g1763 261 CDD homeodomain 73 129 IPR001356 GO:0003677
Aed7g1763 261 Pfam Homeodomain 73 126 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1763 Aed-Chr7 21071227 21074213 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1763 1 261 Homeobox Transcription Factor Family AT1G69780 56.757 5.11e-99 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Aed7g1763 Homeodomain 1.2e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1763 K09338 - gmx:100801479 462.225