Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1762 ATGGTGCAAGATATGAAGCAGCAGGACAACAACAACAATGGAGAATCTAAGAAGAAGGAGCGTCACGTTGTAACTTGGAATCAAGAGGAGGATGATATACTAAGAGAGCAGATTGGTATTCATGGAACCGAAAATTGGGCAATTATTGCATCTAAGTTCAAAGACAAAACGACAAGACAGTGCAGAAGAAGATGGTACACTTACTTGAATTCTGATTTCAAGAAAGGTGGATGGACAGCTGAGGAAGACATGCTCTTATGTGAGGCTCAAAAAATATTTGGTAATAGATGGACAGAAATAGCCAAGGTGGTTTCAGGCAGAACCGATAATGCTGTGAAAAATCGTTTCTCCACACTCTGCAGGAAGAAACAAAAATATGCCGCTGTAGCAAAAGAGAACAATGCTGCATACATCAATTCAAATAACAAGAGGATGATGTTACAACATGATAATAATATGGATACAACATCAGAATCTGGAGTACCTATTAAGAATTTGAGGAGGGCCCATATCCCTGATGATGTAGAAAGGATCAAATTTGAGGACAGATCACATTTACGAAATGGAACTCCAACAAATCAGCAGCCAAGAGCGCCATTTGCTGTATTAGCTCAAAATTCTCATAACTCAAACAACTTGCCAGACCAGCAGCATGTTTGCAATCCCAAGTTTAGCAGTTCCGGTAGTTGTCTTTGTATTGAACTTACCCAAAATACCAAGGTTCAAGGAACATTTCTCAAAAAAGATGACCCAAAGATAAGTGCATTGATGCAACAGGCGGAGTTACTAAGTTCACTAGCTCTAAAAGTTGATACAGAGAACATGGACCAAAGTCTTGAAAACGCATGGAAGGTTCTCCAAGAGTTCCTGAACCGAACCAAAGAATCAGATATTCCTGGACAAAAGATTCCAGATTTAAGGCTTGTAGATCTTAAAGATATGATTGAGGGCTTGAAGAGTGGTAATGAGGAAGGCCAGGTTCTTCAAGAGCTTTTGAACCGAACCAAAGAATCAGATATCCCTGAACATAAGATTCCAGATTTACGGCTTCTAGATCTTAAAGATATGATTGAGGACATGAAGAGTGGTAATGAGGAAGGCCAGGTTCTCCAAGAGTTTCAGAACAGAACAAAAGAATCATATATACCTGGGCATAAGATTCCAGATTTACAGCTTGTAGATCTTAAACATATGATTGAGGGCTTGACGAGTAGTAATGAGGAAGGCCAAGCTTGTTGGAGGCGGCAAGTGGAATGTTGTGAAGACTCTCCAGGCAGTTCTGGATACAGTACAGGATCAATTTTCCTGTGTCAGTCAGCTGGTGATAATTTGGAGCATTCATTGCATCAGGATATTGAAACTGAAATGAAGTCTGAACAACTTGAAGATGAAAAAGGAGTAGATACGTTACCATGTTGCGAGAAACAGATAAACAAAGATGAGATTGTTTCTACCTCACCAAGATTGGAGTTCAGCTCCCCTCTTCAAGTAACCCCTCTGTTTAGATCCTTGGCAGCAGGAATTCCCAGCCCACAATTTTCAGAAAGTGAAAGGAACTTCTTAAGGAAAACACTAGGAATGGAATCTCCGTCCATCAACCCGAGTGCCAACTCATCACAACCACCACCCTGCAAAAGATCCCTACTGCCTAGTCTATAA 1659 0.4057 MVQDMKQQDNNNNGESKKKERHVVTWNQEEDDILREQIGIHGTENWAIIASKFKDKTTRQCRRRWYTYLNSDFKKGGWTAEEDMLLCEAQKIFGNRWTEIAKVVSGRTDNAVKNRFSTLCRKKQKYAAVAKENNAAYINSNNKRMMLQHDNNMDTTSESGVPIKNLRRAHIPDDVERIKFEDRSHLRNGTPTNQQPRAPFAVLAQNSHNSNNLPDQQHVCNPKFSSSGSCLCIELTQNTKVQGTFLKKDDPKISALMQQAELLSSLALKVDTENMDQSLENAWKVLQEFLNRTKESDIPGQKIPDLRLVDLKDMIEGLKSGNEEGQVLQELLNRTKESDIPEHKIPDLRLLDLKDMIEDMKSGNEEGQVLQEFQNRTKESYIPGHKIPDLQLVDLKHMIEGLTSSNEEGQACWRRQVECCEDSPGSSGYSTGSIFLCQSAGDNLEHSLHQDIETEMKSEQLEDEKGVDTLPCCEKQINKDEIVSTSPRLEFSSPLQVTPLFRSLAAGIPSPQFSESERNFLRKTLGMESPSINPSANSSQPPPCKRSLLPSL 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1762 552 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 70 124 IPR017930 -
Aed7g1762 552 ProSiteProfiles Myb-like domain profile. 70 120 IPR001005 -
Aed7g1762 552 PANTHER MYB PROTEIN-RELATED 389 549 - -
Aed7g1762 552 PANTHER MYB PROTEIN-RELATED 14 326 - -
Aed7g1762 552 Pfam Myb-like DNA-binding domain 26 86 - -
Aed7g1762 552 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 18 69 IPR017930 -
Aed7g1762 552 SMART sant 22 71 IPR001005 -
Aed7g1762 552 SMART sant 74 122 IPR001005 -
Aed7g1762 552 PANTHER TRANSCRIPTION FACTOR MYB88 389 549 - -
Aed7g1762 552 PANTHER TRANSCRIPTION FACTOR MYB88 14 326 - -
Aed7g1762 552 CDD SANT 25 69 IPR001005 -
Aed7g1762 552 SUPERFAMILY Homeodomain-like 48 126 IPR009057 -
Aed7g1762 552 MobiDBLite consensus disorder prediction 1 23 - -
Aed7g1762 552 ProSiteProfiles Myb-like domain profile. 18 69 IPR001005 -
Aed7g1762 552 Gene3D - 14 74 - -
Aed7g1762 552 MobiDBLite consensus disorder prediction 524 552 - -
Aed7g1762 552 MobiDBLite consensus disorder prediction 526 546 - -
Aed7g1762 552 Gene3D - 76 155 - -
Aed7g1762 552 CDD SANT 78 119 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1762 Aed-Chr7 21030725 21036826 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1762 15 326 MYB Transcription Factor Family AT2G02820 57.911 1.00e-123 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aed7g1762 Myb_DNA-bind_6 1.9e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1762 K09422 - gmx:100803361 943.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g1762 7 21030725 21036826 Aed11g0328 11 2667400 2674853 PCT