Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1760 ATGGGTAACTGCCTAGATTCTTCAGCTAAAGTAGAAGCAGCTCATAGCTCCAGAACCACTTCTGCATCAGGAATTTCAAAAACTAGTCCTTCGTCTGTTCCTTCCAGCTTGTCTATTCTGTCATATAGTGAAGCAAGTGATTTCTCAAATCTTCCCACACCAAGGTCTGAGGGTGAAATTTTGTCTTCCCCAAATCTTAAGGCCTTTACCTTCAATGAGCTAAAGAATGCCACCAGAAATTTTCGCCCCGACAGCCTTCTCGGCGAAGGAGGATTTGGTTATGTTTACAAGGGGTGGATTGATGAGCACACATTCACAGCTTCAAAACCTGGATCAGGAATGGTTGTTGCTGTTAAGAAACTCAAGCCTGAAGGGTTACAAGGTCATAAGGAGTGGCTGACTGAAGTGGACTACCTTGGGCAACTTCACCATCAGAATCTGGTGAAATTGATTGGATACTGTGTGGAGGGAGAGAACCGGCTTTTGGTATATGAGTTTATGTCCAAAGGGAGCTTAGAGAATCATCTGTTTAGAAGAGGACCACAACCTCTTTCTTGGTCAGTGAGGATGAAAGTGGCCATTGGTGCTGCCAGAGGACTCTCTTTTCTTCATAATGCAAAATCACAAGTCATATACCGTGATTTTAAAGCATCCAATATCCTACTAGACGCTGAGTTCAATGCTAAACTCTCTGATTTTGGCTTAGCAAAGGCTGGTCCTACTGGTGATAGAACACATGTCTCTACTCAAGTCATGGGAACTCAAGGATATGCAGCACCTGAATATGTTGCAACAGGTCGGCTGACGGCTAAGAGTGATGTATACAGCTTTGGAGTTGTGTTGCTTGAACTATTGTCCGGTAGACGAGCCGTTGACAGATCAAAAGCCGGTGTAGAGCAGAATCTAGTAGAGTGGGCAAAACCATATTTGGGTGACAAAAGAAGACTATTTAGGATCATGGACACCAAGTTGGGAGGCCAATACCCTCAAAAAGGAGCATACATGGCTGCCACTCTTGCTCTAAGATGCCTTAATCGCGAAGCCAAGGCAAGGCCTCCAATGACAGAGGTTTTAGACACTCTTGAACTGATTGCAGCCTCAAAAACTGCAGGAGGGAGAAACTCTCAATTAGAACAGAAGAGAGTCCATGCTCCTCCTGTCAGAAAGTGTAGTGTACAAAAAGGGTCCCATTTGAATCATAATACTCCTACTGCATTCCCATAA 1224 0.4428 MGNCLDSSAKVEAAHSSRTTSASGISKTSPSSVPSSLSILSYSEASDFSNLPTPRSEGEILSSPNLKAFTFNELKNATRNFRPDSLLGEGGFGYVYKGWIDEHTFTASKPGSGMVVAVKKLKPEGLQGHKEWLTEVDYLGQLHHQNLVKLIGYCVEGENRLLVYEFMSKGSLENHLFRRGPQPLSWSVRMKVAIGAARGLSFLHNAKSQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTQGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDRSKAGVEQNLVEWAKPYLGDKRRLFRIMDTKLGGQYPQKGAYMAATLALRCLNREAKARPPMTEVLDTLELIAASKTAGGRNSQLEQKRVHAPPVRKCSVQKGSHLNHNTPTAFP 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1760 407 PANTHER OS01G0588500 PROTEIN-RELATED 17 388 - -
Aed7g1760 407 SUPERFAMILY Protein kinase-like (PK-like) 56 362 IPR011009 -
Aed7g1760 407 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
Aed7g1760 407 MobiDBLite consensus disorder prediction 10 34 - -
Aed7g1760 407 PANTHER PROTEIN KINASE 2B, CHLOROPLASTIC 17 388 - -
Aed7g1760 407 ProSitePatterns Protein kinases ATP-binding region signature. 87 120 IPR017441 GO:0005524
Aed7g1760 407 Gene3D Phosphorylase Kinase; domain 1 57 166 - -
Aed7g1760 407 Gene3D Transferase(Phosphotransferase) domain 1 167 385 - -
Aed7g1760 407 CDD STKc_IRAK 87 364 - -
Aed7g1760 407 Pfam Protein tyrosine and serine/threonine kinase 85 360 IPR001245 GO:0004672|GO:0006468
Aed7g1760 407 ProSiteProfiles Protein kinase domain profile. 81 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g1760 407 MobiDBLite consensus disorder prediction 370 407 - -
Aed7g1760 407 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1760 Aed-Chr7 20994159 20997978 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1760 57 367 Glycoside Hydrolase AT3G07070 52.548 2.22e-113 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Aed7g1760 PK_Tyr_Ser-Thr 8.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1760 - - gmx:100305401 739.184