LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed7g1757	ATGGGAAGACAAAGTCCTGGAAAATGGATCAGAAACTTACTTCTGGGGAAGAAATCATCATCATCATCAAAGTCTAAGTCTTCTAGAGAGAAAGACATTTATAAACCTTCAAGTAACAAGAATGTTCCGGCGGCGGCGGCTTACGAGGCATCCATGTCTGCTCCAACACCTGGAGCTAATGCTACCAAAAGAGTGGTATCAGAAAAGGAAGTAGTAGTTAGTGTATCATCAAATGATGGGGCAATTCTTTCAATTGGGTCAGACAAACAGGACAATGCACAATCACCACTTGCTAATTTTGGTTCTGTGAACCATCATGAGAAAAACAGGCTAACAGAAACAGCTATAGTAGTAGTTCAGGCTGCTATAAGAGGCTATCAGGCGCGTGGAAAATTTAAAACTCTCAAAGGTATCATACCACTGCAAGCTTTTATTCGTGGCCAGTTGGTTCGACGACAAGCTATTTCTGCTTTGTATTGTGTGAATTCAATAGTTAAATTTCAAGCATTGGTTCGCGGTTACAAGGTTAGGCACTCTGATGTTGGGCTTGCAGTCCAGAAAATTTTCAAGCTTCTGGCTCCACCACCCTCTGCTGTTTCTCCAAATCTCAAATATAATGCTGCTGGTGAACCTAAATTGGCTTGGGAGTGGCTTGACCGTTGGACGAAATCAAACTTTTGGGAGCCTCTCCAAGAACTGCAGAAACCTGATTCAATGTCCGATAAGAAAAATGGAAGTTGTCAAACAATTCAAACTAACAAGGGAAATGTTAAGAGAAATGCCAAGAAAGCACCTTCTGTAGTGAGGGCTGGTGATGATTCAATTTCAGATTCTAACAAACATAAACGGTATCTGAAAAAGGATTCAAACCTCCCATTGCATTCAGCTAAGGAACTTGAGAAAAGGAGTTCTAAAAAAACTCAAACTCAGAATGCTTCTGATAAATCTGAGGTTGCTAATGAGAAAAGAACAGAAAACACAAGAAAAGTTTCAGGTTATGCAACAGTCAATGATGTTCAAGAGGAAGATGTTAGTGCTTCTGCAGAGAAGATGAAAGATTTGGCAGTGTCAAAGTCAAAAAAGTCTGACCTTAAGAAGAGTCTTGGAGAGCAAGCAAAAGAGCATGAAAACAATGAGTCATATAATGATACTATTGCTCCCTTGTTACATTCTAGCTTGATGAATGGTAAAGATGGAGGACTCATTGAGGACTTGAATAGTGAAAATTCTAAGAATTTTCAGAGAAGAGCTTCCCTGCCTGCTAATTTTACAGATCATGAAAATCTGTTACAGAATAACAACGGTAACACTCCAAGACGGCCTAGCTATATGGCCGCCACTGAATCTACAAAAGCTAAGCTAAGAGGACATGGCTCTCCAAGGTCTGTTAGCGATTTGGCAGACACAAATAGTATTATAACCCGGCGGCTTTCACTTTCGTCTTCGCTTAATGGCAAGTTAGGCTCATTCTCTCCAAGATCAGATAGATTGGCTGCCTTGAGCAACAAGATAAGGACTGACAGGTCTCTATCATCTTCAAGGGATGGCACTGATAAGTTGATCCAACCTAAGTGGAGAAGGTGA	1584	0.4072	MGRQSPGKWIRNLLLGKKSSSSSKSKSSREKDIYKPSSNKNVPAAAAYEASMSAPTPGANATKRVVSEKEVVVSVSSNDGAILSIGSDKQDNAQSPLANFGSVNHHEKNRLTETAIVVVQAAIRGYQARGKFKTLKGIIPLQAFIRGQLVRRQAISALYCVNSIVKFQALVRGYKVRHSDVGLAVQKIFKLLAPPPSAVSPNLKYNAAGEPKLAWEWLDRWTKSNFWEPLQELQKPDSMSDKKNGSCQTIQTNKGNVKRNAKKAPSVVRAGDDSISDSNKHKRYLKKDSNLPLHSAKELEKRSSKKTQTQNASDKSEVANEKRTENTRKVSGYATVNDVQEEDVSASAEKMKDLAVSKSKKSDLKKSLGEQAKEHENNESYNDTIAPLLHSSLMNGKDGGLIEDLNSENSKNFQRRASLPANFTDHENLLQNNNGNTPRRPSYMAATESTKAKLRGHGSPRSVSDLADTNSIITRRLSLSSSLNGKLGSFSPRSDRLAALSNKIRTDRSLSSSRDGTDKLIQPKWRR	527

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed7g1757	527	MobiDBLite	consensus disorder prediction	1	40	-	-
	Aed7g1757	527	MobiDBLite	consensus disorder prediction	274	308	-	-
	Aed7g1757	527	MobiDBLite	consensus disorder prediction	343	380	-	-
	Aed7g1757	527	Gene3D	-	108	158	-	-
	Aed7g1757	527	Pfam	Protein of unknown function (DUF4005)	431	503	IPR025064	-
	Aed7g1757	527	PANTHER	IQ CALMODULIN-BINDING MOTIF PROTEIN	1	524	-	-
	Aed7g1757	527	ProSiteProfiles	IQ motif profile.	112	136	IPR000048	GO:0005515
	Aed7g1757	527	PANTHER	IQ-DOMAIN 5-RELATED	1	524	-	-
	Aed7g1757	527	MobiDBLite	consensus disorder prediction	233	381	-	-
	Aed7g1757	527	MobiDBLite	consensus disorder prediction	504	527	-	-
	Aed7g1757	527	Pfam	IQ calmodulin-binding motif	141	153	IPR000048	GO:0005515
	Aed7g1757	527	Pfam	IQ calmodulin-binding motif	115	129	IPR000048	GO:0005515
	Aed7g1757	527	Pfam	IQ calmodulin-binding motif	162	177	IPR000048	GO:0005515
	Aed7g1757	527	ProSiteProfiles	IQ motif profile.	136	163	IPR000048	GO:0005515
	Aed7g1757	527	MobiDBLite	consensus disorder prediction	240	259	-	-
	Aed7g1757	527	SMART	iq_5	159	181	IPR000048	GO:0005515
	Aed7g1757	527	SMART	iq_5	134	155	IPR000048	GO:0005515
	Aed7g1757	527	SMART	iq_5	111	133	IPR000048	GO:0005515
	Aed7g1757	527	MobiDBLite	consensus disorder prediction	508	527	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed7g1757	Aed-Chr7	20953055	20958765	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aed7g1757	99	527	IQD Protein Family	AT2G02790	34.542	6.51e-52	184

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed7g1757	-		-	gmx:100800688	715.301