Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1754 ATGATGAACTTGTTTCTCTTTCTCTTGGAATTTCATCAACCGATCAACATGAAAAGAAGAAGAAGAAGAAAACTCAAAAAGATGATGAGAGAAAATGAGGATTTGAAAGATAAACTTGCACTTGGGTTAGATGTCAGATTTGACCCTAATTCAGCTATAAAAATTCCTAGCACTCATGATGAAAGTAGCTGCTGCGATGGAGAAAGGAAGGAAGAGGAACTCCGAGAGATATGGCCACCAAGTAAAGTTCTCAAAACAATGATGAGAACTATGGATAGAAGTGAAGCTTATTCGAATTCTCAACATGCTATGAATGATGGGTGCCAATGGAGAAAATATGGGCAGAAAATGGCAAAAGGGAATCCATGCCCTCGAGCATACTACCGATGCACTGTCTCTCCATCTTGTCCAGTGAAAAAACAGGTTCAAAGATGTTCTGAAGACATGTCAATCTTGATTAGCACCTATGAAGGAACTCACAACCACACACTTCCTACTTCAGCCACTACCATAGCCTACACAACTTCTGCAGCTGCTTCCATGCTTCAGTCTCTTTCATTGAGCTCACAACTAGGACTAAGTACCAATTCAGATTATTCAGTCCCTCTCATCAAGTCTAGTAATGTTCCTTATTATAACCTTAATGCCCTAAACTTCACATCATCATCACGCTATGATCAACAGTTTTCACAATCACAACACTTGGACATCTTTGTCAACCTAATTACATTAGCATTAATCATGCCATTTCTCAACAAACTTTACCTTATTCTAGATGATGTAATGTGTACATTATCTCACTTCTATTATGTGACCTATTTTCTCTAA 828 0.3816 MMNLFLFLLEFHQPINMKRRRRRKLKKMMRENEDLKDKLALGLDVRFDPNSAIKIPSTHDESSCCDGERKEEELREIWPPSKVLKTMMRTMDRSEAYSNSQHAMNDGCQWRKYGQKMAKGNPCPRAYYRCTVSPSCPVKKQVQRCSEDMSILISTYEGTHNHTLPTSATTIAYTTSAAASMLQSLSLSSQLGLSTNSDYSVPLIKSSNVPYYNLNALNFTSSSRYDQQFSQSQHLDIFVNLITLALIMPFLNKLYLILDDVMCTLSHFYYVTYFL 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1754 275 ProSiteProfiles WRKY domain profile. 99 165 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed7g1754 275 Pfam WRKY DNA -binding domain 105 162 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed7g1754 275 PANTHER WRKY TRANSCRIPTION FACTOR 72B 15 229 - -
Aed7g1754 275 Gene3D WRKY domain 91 166 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed7g1754 275 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 15 229 IPR044810 GO:0003700
Aed7g1754 275 SMART WRKY_cls 104 164 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed7g1754 275 Coils Coil 18 38 - -
Aed7g1754 275 SUPERFAMILY WRKY DNA-binding domain 101 165 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1754 Aed-Chr7 20919323 20922550 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1754 48 193 WRKY Transcription Factor Family AT4G04450 54.054 6.41e-45 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed7g1754 WRKY 8.8e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1754 - - gmx:102666229 261.536