Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1753 ATGTCGAACTTGCAGTTACACCTTCACTCTCCACCATCATCATCACTCTTATCCTCTTCTTCTTCTCTTAAGCTATTCCCAAATCACTCTTTCTCCCAAAAGTCCCTTCCTTTCAACTCTCCTAAACCCTTCACCCTCAGATGCCGCCACTCTGACCTCTTCGACCAGAACACCTTAGCATCCACACCACGACCAACAAGACCCTCTTCTTCTTCAGTTGCAGCTTTGCCGCCTAGGGTTTATGTTGGTTACTCCATCTACAAAGGGAAGGCTGCGCTTACATTGACTCCTAGGCCCCCAGAGTTTGTGCCGCTTGATTCAGGGGCATACAAAATATCCAAGGAAGGTTATGTGCTGCTACAGTTTGCACCTGCGGTTGGTATGCGCCAATATGATTGGAATAGAAAGCAGGTGTTTTCCTTATCGGTGGCTGAAATGGGAAGTGTGATTAGCCTTGGTGCAAATCAGTCTTATGAATTTTTTCATGATCCTTTCAAGGGTAAAAGGCTTGTGGATGTGAATGAAATCATCAATATCCCTGTTACAAAAGCAGAGTTAGCAGTTTTGACCTCAACTTTCAATTTCATCATGCCATACCTTCTGGGTTGGCATACCTTTGCAAACTCCATAAAGCCAGAAGATAGTGAAGCGAATAATGCCAACCCAAGATATGGAGGAGACTATGAATGGAACAGATAG 699 0.4449 MSNLQLHLHSPPSSSLLSSSSSLKLFPNHSFSQKSLPFNSPKPFTLRCRHSDLFDQNTLASTPRPTRPSSSSVAALPPRVYVGYSIYKGKAALTLTPRPPEFVPLDSGAYKISKEGYVLLQFAPAVGMRQYDWNRKQVFSLSVAEMGSVISLGANQSYEFFHDPFKGKRLVDVNEIINIPVTKAELAVLTSTFNFIMPYLLGWHTFANSIKPEDSEANNANPRYGGDYEWNR 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1753 232 MobiDBLite consensus disorder prediction 212 232 - -
Aed7g1753 232 Pfam Whirly transcription factor 86 168 IPR013742 GO:0003697|GO:0006355|GO:0006952
Aed7g1753 232 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL 17 169 IPR013742 GO:0003697|GO:0006355|GO:0006952
Aed7g1753 232 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY1, CHLOROPLASTIC 169 232 - -
Aed7g1753 232 SUPERFAMILY ssDNA-binding transcriptional regulator domain 78 232 IPR009044 GO:0003677|GO:0006355
Aed7g1753 232 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL 169 232 IPR013742 GO:0003697|GO:0006355|GO:0006952
Aed7g1753 232 Gene3D Transcriptional Coactivator Pc4; Chain A 171 221 IPR009044 GO:0003677|GO:0006355
Aed7g1753 232 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY1, CHLOROPLASTIC 17 169 - -
Aed7g1753 232 Gene3D Transcriptional Coactivator Pc4; Chain A 71 170 IPR009044 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1753 Aed-Chr7 20912230 20915378 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1753 13 232 Whirly Transcription Factor Family AT1G14410 50.000 1.00e-81 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Whirly Aed7g1753 Whirly 3.3e-35 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1753 - - gmx:100789252 361.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0319 11 2578394 2583175 Aed7g1753 7 20912230 20915378 PCT