Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1752 ATGATTTCCAACCAAGTTAACGTGTTCCGCTCTCCATTTCGCGTTCTGAAATATCCATGCACGAACCCACCACCCAACACGCGTCTCTTGCTTCTTCAGCTTCATGCCAACACAAACTCTGCCTCACCAACCATCCTCTGTTCATCACTCAGTGATGACTCATTCTCCACCCCAAAACCGAACCAGGCACACCATCTTTTTCTTTTCTCTTACATTATTTTGTTTTGTTGTCCATTTGGGTTACAATCCTCCAGAGGAGCTGTTTGGTCTGGAGGTGGAACTCAAGCCAAGATATTTTCTGATAAAATATTGTGCTATGTGGTGCGCAAGGTTAATTCTAATACACCAGAACCAAGGTCCTGGTTTGGTCCAAATGGACAGTATATCAGAGAGCTACCTTGTCCAAGTTGCCGGGGAAGGGGTTACACCCCTTGTACAGGTACAGAGTGTGGAATAGAAAGATCAAGGCCAGACTGTCCAAAATGTTATGGAAAGGGTATACTGACTTGCCACCAGTGCTCTGGAGATCGTGTTATATGGGAGGAATCAATTGACGAACAACCATGGGAGAGGGCCCGTTCTATTTCCCCACTTAAAGTGAAAGAAGACGATGAAGTTGACAAATTAGACATAAAGCTAGATGTGAAGAAAAAATCCAAGCGTGTTTACCAGTCACCACCTCCAGAAGTTGGATTAAAGATTAGTCGTTCATTAAAAAGTCTCAATGCCAAAACTGGTCTATTTAGCAACAGAATGAAGATTATCCACCAGGATCCCAAGCTTCAGGCACAGCGTGTGGCTGCTATTAAGAAAGCCAAGGGAACTGCTGCAGCAAGAAAGCATACATCCAAAACTATGAAAGCTTACTTTAGTGATCCAATAAACCGTCAGAAAAGGAGCATGGCCATGAAGGGAATGAAATTCTACTGTCAAAACTGTGGACGTGAAGGGCATAGGAGTTACTACTGTCCAGAACTCAAGGATGGCTTGATTGATCGGCGATTCACGTGTAGGGTCTGTGGGGAAAAAGGCCACAACAGAAGAACATGTAGAAAGTTAAGGGTAAGCCTTAACAATGGGAGAACGATAAAACGCCATCAGTGTAAAGTATGTCGTGAATTCGGCCATAACCGCAGGACCTGCCCTCAAGCTGTTCCTTCTTTTGCTGTTCCTAGTAAAATAAGGAACACGGCCTCTCAAAGACCATACAAATGTAGGTTGTGTAAGAAAGAGGGACATAATACTAGGACATGTCCAAGTAGGACAGTTGATACTGAGCATCCTCAAGACTAA 1293 0.4393 MISNQVNVFRSPFRVLKYPCTNPPPNTRLLLLQLHANTNSASPTILCSSLSDDSFSTPKPNQAHHLFLFSYIILFCCPFGLQSSRGAVWSGGGTQAKIFSDKILCYVVRKVNSNTPEPRSWFGPNGQYIRELPCPSCRGRGYTPCTGTECGIERSRPDCPKCYGKGILTCHQCSGDRVIWEESIDEQPWERARSISPLKVKEDDEVDKLDIKLDVKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGLFSNRMKIIHQDPKLQAQRVAAIKKAKGTAAARKHTSKTMKAYFSDPINRQKRSMAMKGMKFYCQNCGREGHRSYYCPELKDGLIDRRFTCRVCGEKGHNRRTCRKLRVSLNNGRTIKRHQCKVCREFGHNRRTCPQAVPSFAVPSKIRNTASQRPYKCRLCKKEGHNTRTCPSRTVDTEHPQD 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1752 430 ProSiteProfiles Zinc finger CCHC-type profile. 337 352 IPR001878 GO:0003676|GO:0008270
Aed7g1752 430 PANTHER ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN 100 423 - -
Aed7g1752 430 SUPERFAMILY Retrovirus zinc finger-like domains 307 353 IPR036875 GO:0003676|GO:0008270
Aed7g1752 430 Gene3D - 362 427 - -
Aed7g1752 430 Gene3D - 304 355 - -
Aed7g1752 430 SMART c2hcfinal6 367 383 IPR001878 GO:0003676|GO:0008270
Aed7g1752 430 SMART c2hcfinal6 336 352 IPR001878 GO:0003676|GO:0008270
Aed7g1752 430 SMART c2hcfinal6 404 420 IPR001878 GO:0003676|GO:0008270
Aed7g1752 430 SMART c2hcfinal6 309 325 IPR001878 GO:0003676|GO:0008270
Aed7g1752 430 SUPERFAMILY Retrovirus zinc finger-like domains 358 422 IPR036875 GO:0003676|GO:0008270
Aed7g1752 430 PANTHER ZINC FINGER CCHC DOMAIN CONTAINING PROTEIN 100 423 - -
Aed7g1752 430 ProSiteProfiles Zinc finger CCHC-type profile. 310 325 IPR001878 GO:0003676|GO:0008270
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1752 109 423 C2H2 Transcription Factor Family AT5G20220 65.094 4.08e-145 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1752 - - gmx:100800156 657.136