Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1750 ATGGAGTTTGCACCTGTGAAGTCTGAACTAAGTCCAAGGAGCCATAGGTTGCTCATGATAGATAGTAGTGAGGTTATTGGAACCAAGTGTGTCAAAAGGCGGCGTAGAGATTCGTCTACGGTGGTGTTAGGTGGCAATGGACAACAAGGTGAACAACACAGGTGGACTGGAAGGTATGAAGCACATCTATGGGATAAAGGGACCTGGAATCCCACTCAGAAGAAGAAAGGAAAGCAAGGAGCTTACAATGATGAAGAAGCTGCTGCTAGAGCTTATGACTTGGCTGCACTCAAGTATTGGGGAACATCAACTTTCACAAATTTTCCTGTATCTGATTATGAGAAAGAAATTGATATAATGAAAACTGTAACCAAAGAAGAATATCTTGCTTCATTGAGAAGGAGGAGCAGTGGTTTTTCCAGAGGTGTATCAAAGTATAGAGGAGTAGCAAGGTGA 456 0.4254 MEFAPVKSELSPRSHRLLMIDSSEVIGTKCVKRRRRDSSTVVLGGNGQQGEQHRWTGRYEAHLWDKGTWNPTQKKKGKQGAYNDEEAAARAYDLAALKYWGTSTFTNFPVSDYEKEIDIMKTVTKEEYLASLRRRSSGFSRGVSKYRGVAR 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1750 151 SUPERFAMILY DNA-binding domain 52 111 IPR016177 GO:0003677
Aed7g1750 151 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 52 151 - -
Aed7g1750 151 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 46 - -
Aed7g1750 151 SMART rav1_2 52 115 IPR001471 GO:0003700|GO:0006355
Aed7g1750 151 Gene3D AP2/ERF domain 49 111 IPR036955 GO:0003700|GO:0006355
Aed7g1750 151 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 52 151 - -
Aed7g1750 151 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 46 - -
Aed7g1750 151 ProSiteProfiles AP2/ERF domain profile. 44 109 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1750 Aed-Chr7 20900554 20902070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1750 53 151 AP2-EREBP Transcription Factor Family AT5G17430 67.647 8.11e-42 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aed7g1750 AP2 0.00012 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1750 - - gmx:100799621 267.7