Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1737 ATGTTTGGTGCCTTGAATTCAGGTTCAAAATCCATGGCTAATTTGGTGAATGTCACGCATAGGCCCTTCTTTCAAGGGCTTGAGAAAGAAGAGAATTTTGATGATGAGGACTTTGTGGTGTGCCTCCATCAACCCGGTAAGAAAAGGAGGCTCAAAAGCGAACAGGTTCAGTTTCTTGAAAGTAACTTCGAGGTAGAAAACAAGCTTGAACCCGAAAAGAAGGTCCAACTTGCAAAGGAACTTGGCATGCAACCAAGGCAAGTGGCCATATGGTTCCAAAACCGAAGGGCAAGGTTCAAGACCAAACAGCTTGAGAAAGACTATGGCATGTTGAAAGCTAGCTATGACTTACTCAAAAGGGACCGTGACAATCTCCTTCATGAGAATGACAAGTTAAAGGAAGAGCTAAAAGTGATGTGCTTGATTCTGAGAGCCCACACTTCACTGATGGAAGAAACCAATCCTCCTCAGATGATTTCTCACAAGATGAGGATGACATTCTTAACCCAAAATATCTTGACCATGCCGTTCTTACCAAAGGTTGAAGATGCCTGCTATGATGAACCACATGAAAGTTCTTGCAGCTTCCGGTTCCCGGTTGAAGATCAGGCCTTCTATTTTTGGTCTTATTGA 633 0.4329 MFGALNSGSKSMANLVNVTHRPFFQGLEKEENFDDEDFVVCLHQPGKKRRLKSEQVQFLESNFEVENKLEPEKKVQLAKELGMQPRQVAIWFQNRRARFKTKQLEKDYGMLKASYDLLKRDRDNLLHENDKLKEELKVMCLILRAHTSLMEETNPPQMISHKMRMTFLTQNILTMPFLPKVEDACYDEPHESSCSFRFPVEDQAFYFWSY 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1737 210 PANTHER HOMEOBOX LEUCINE ZIPPER FAMILY PROTEIN 167 210 - -
Aed7g1737 210 PANTHER HOMEOBOX LEUCINE ZIPPER FAMILY PROTEIN 7 141 - -
Aed7g1737 210 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 7 141 IPR045224 GO:0003700
Aed7g1737 210 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 167 210 IPR045224 GO:0003700
Aed7g1737 210 Pfam Homeobox associated leucine zipper 102 137 IPR003106 GO:0006355|GO:0043565
Aed7g1737 210 Coils Coil 115 135 - -
Aed7g1737 210 PRINTS Lambda-repressor HTH signature 73 82 IPR000047 GO:0003677
Aed7g1737 210 PRINTS Lambda-repressor HTH signature 82 98 IPR000047 GO:0003677
Aed7g1737 210 ProSiteProfiles 'Homeobox' domain profile. 42 102 IPR001356 GO:0003677
Aed7g1737 210 SUPERFAMILY Homeodomain-like 39 104 IPR009057 -
Aed7g1737 210 Pfam Homeodomain 47 100 IPR001356 GO:0003677
Aed7g1737 210 Gene3D - 41 108 - -
Aed7g1737 210 SMART HOX_1 44 106 IPR001356 GO:0003677
Aed7g1737 210 ProSitePatterns 'Homeobox' domain signature. 77 100 IPR017970 GO:0000981|GO:0006355
Aed7g1737 210 CDD homeodomain 45 103 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1737 Aed-Chr7 20740179 20741213 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1737 6 159 Homeobox Transcription Factor Family AT3G01470 47.742 2.66e-40 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Aed7g1737 Homeodomain 1.7e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1737 - K09338 gmx:100804328 228.794
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0330 11 2696589 2698804 Aed7g1737 7 20740179 20741213 PCT
Aed7g1737 7 20740179 20741213 Aed11g0300 11 2450625 2453061 PCT