Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1716 ATGATGAAGGGATGGGATGGGATTCAATCTTCGTTCTCTTCTCGATCGAGTACCACGTTGGGCCAACCTCCCTCGCGAACGGTTCGACTCGGCCGAGTTCAGCCTCAGGCTCCGACTTACCGCACCATCTTCTGCAATGACCGCGAGGCCAATCTTCCCATCCGATTCAAGGGGAATTCTATATCAACTACCAAATATAACTTCTTCACATTTTTGCCAAAAGGATTATTTGAACAGTTCAGACGGGTTGCCAATCTCTACTTTCTTACAATCTCAATTTTGTCAACTACGCCAATTAGTCCTGTCTCTCCAATAACTAATGTGCTTCCTCTATCTCTGGTGCTTCTTGTCTCTCTTATTAAGGAAGCGTTTGAGGACTGGGTTAAGCAGGATGGATTCTTTCCTGCAGATCTGCTTTTCTTGGCTAGCACTAATGCAGATGGTGTCTGCTACATTGAGGGTTGCAGTCTCAGGAATACAGAGTATATTGTTGGGGTTGTTATATTTACAGGACATGAAACAAAGGTGATGATGAACACAATGAATGTTCCTTCCAAAAGAAGTACATTGGAGAGGAAGCTTGACAAGCTCATATTAACTCTATTTGCAACTCTCTTCATGATGTGTTTCATTGGAGCCATAGGCAGTGCTATCTTCGTAAACAAAAAGTATTTTTACTTACATCTTGATTCATCAGAGGAGGGCTCAGCACAGTTCAACCCCAAAAACAGATTTTTGGTTTTTATCCTGACTATGTTTACCCTAATCACACTATACTCAACAATCATTCCCATTTCACTTTATGTGTCCATAGAGATGATAAAATTTATTCAGTCAACTCAATTTATCAACAAGGACTTGGACATGTACCATAAAGAAACCAATACACCTGCATTGGCCAGAACTTCAAATCTGAATGAAGAACTTGGACAGGTGGAATACATTTTCTCCGACAAAACTGGGACTCTGACAAGAAATTTGATGGAGTTCTTTAAGTGTTCAATTGGAGGAGAGGTCTATGGAAATGGCGTGACTGAAATTCAGAGAGGATTAGCGGAGCGCAATGGCATCAAGATTGAGGAAGATAGATCTCCCAATGCAGTGCATGAGAGGGGTTTTAATTTTGATGACGCTAGAATTATGAGAGGAGCTTGGAGGAATGAGCCTAATCCTGATGTCTGCAAGGAATTCTTCAGATGCCTTGCTATATGCCATACTGTACTGCCTGAGGGTGAAGAGTCCCCTGAAAAGATCAGATATCAAGCTGCATCACCTGATGAGTCTGCTCTGGTTATTGCTGCAAAGCACTTTGGTTTCTTTTTTTACAGACGCACACCTACAATGGTTTATGTTCGCGAATCTCATGTTGAGAAAATGGGCAAAGTTCAAGATGTGTCTTATGAGATTTTAAATGTGCTTGAGTTTAATAGTACAAGGAAGCGTCAGTCTGTTGTTTGTCGTTATCCTGATGGAAGGCTTGTACTATACTGTAAGGGTGCTGATACTGTAATCTACGAGAGACTGGCTGATGGTAATAATAATAATAATATCAAGAAAGTCAACAGGGAGCATTTAGAACAATTTGGATCTGCTGGATTACGCACATTATGCCTAGCCTACAAAGAATTGCATCCTGATGTTTATGAAAGTTGGAATGAGAAGTTTATCCAGGCCAAGTCTTCTCTAAATGATCGTGAAAAGAAATTGGATGAGGTGGCAGAACGTATTGAAAATGATCTCATTTTAATTGGTAGCACAGCCATAGAAGACAAGCTTCAAGAGGGAGTACCATTTTGCATAGAGACTCTTCAAAGAGCTGGTATTAAAATTTGGGTTCTTACTGGGGACAAGATTGAAACAGCAATAAACATTGCCTATGCATGCAACTTGATAAACAATGAGATGAAGCAATTTGTTATTAGTTCAGAAACTGATGCAATTAGAGAAGTTGAAGACAGGGGTGACCAAGTGGAAATTGCACGGTTTATCAAAGATGAAGTGAAAAGAGAGCTGAAGAAATGCCTCGAGGAAGCACAAAGCTGTTTTCACTCCCTATCTGGACCAAAATTAGCCCTTGTAATTGATGGAAAATGTTTAATGTATGCATTGGATCCAAGTTTAAGAGTGATGCTGCTGAATCTAAGTTTGAATTGTCACTCTGTTGTTTGCTGCCGAGTTTCTCCTTTACAGAAAGCACAGGATGTCAGTTCATCTCTATCCAAGAAGTATCCTGAACTATACATGGAAGGAATAAAAAATGTTTTCTTCAAATGGAAAGTCGTGGCCATATGGGCCTTCTTTTCTGTATACCAGTCTCTAATATTCTTCTATTTTGTGAGTTCAACAAATTTAAGTGCTAAAAACTCAGCAGGCAAGATATTTGGACTTTGGGATGTCAGTACAATGGCCTTCACCTGTGTTGTAGTAACCGTCAACTTGCGACTGGTTATGATTTGTAATTCGATCACCAGATGGCACTATATTAGTGTTGGTGGAAGTATATTAGCTTGGTTTATTTTTATTTTTATATATTCAGGGATTAGCACTCCTTATGATCGTCAGGAGAATGTTTATTTTGTCATATATGTCTTGATGAGTTCACTCTACTTCTACGTCATGCTACTTCTAGTTCCTGTTGCTGCACTTTTCTGTGACTTTGTTTACCAAGGGGTTCAAAGATGGTTCTTTCCGTATGATTATCAGATTATTCAAGAATTGCATAGAGATGACGTAGATAGCACTGGTAGGGCACAGCTGTTGGAGGTAGGGAACCAGCTTTCGCCATCCGAGGCAAGGAGTTATGCCCTATCTCAACTTCCACGTGAACTATCAAAGCACACCGGGTTTGCTTTTGATTCACCTGGGTACGAATCCTTCTTTGCTGCACAGCTTGGTGTATATGCCCCACCCAAGGCATGGGATGTTGCAAGAAGGGCTAGCATGAGATCAAAGTCATCAAAGATTGGGCAGAAAAAGTAA 2979 0.4042 MMKGWDGIQSSFSSRSSTTLGQPPSRTVRLGRVQPQAPTYRTIFCNDREANLPIRFKGNSISTTKYNFFTFLPKGLFEQFRRVANLYFLTISILSTTPISPVSPITNVLPLSLVLLVSLIKEAFEDWVKQDGFFPADLLFLASTNADGVCYIEGCSLRNTEYIVGVVIFTGHETKVMMNTMNVPSKRSTLERKLDKLILTLFATLFMMCFIGAIGSAIFVNKKYFYLHLDSSEEGSAQFNPKNRFLVFILTMFTLITLYSTIIPISLYVSIEMIKFIQSTQFINKDLDMYHKETNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEVYGNGVTEIQRGLAERNGIKIEEDRSPNAVHERGFNFDDARIMRGAWRNEPNPDVCKEFFRCLAICHTVLPEGEESPEKIRYQAASPDESALVIAAKHFGFFFYRRTPTMVYVRESHVEKMGKVQDVSYEILNVLEFNSTRKRQSVVCRYPDGRLVLYCKGADTVIYERLADGNNNNNIKKVNREHLEQFGSAGLRTLCLAYKELHPDVYESWNEKFIQAKSSLNDREKKLDEVAERIENDLILIGSTAIEDKLQEGVPFCIETLQRAGIKIWVLTGDKIETAINIAYACNLINNEMKQFVISSETDAIREVEDRGDQVEIARFIKDEVKRELKKCLEEAQSCFHSLSGPKLALVIDGKCLMYALDPSLRVMLLNLSLNCHSVVCCRVSPLQKAQDVSSSLSKKYPELYMEGIKNVFFKWKVVAIWAFFSVYQSLIFFYFVSSTNLSAKNSAGKIFGLWDVSTMAFTCVVVTVNLRLVMICNSITRWHYISVGGSILAWFIFIFIYSGISTPYDRQENVYFVIYVLMSSLYFYVMLLLVPVAALFCDFVYQGVQRWFFPYDYQIIQELHRDDVDSTGRAQLLEVGNQLSPSEARSYALSQLPRELSKHTGFAFDSPGYESFFAAQLGVYAPPKAWDVARRASMRSKSSKIGQKK 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1716 992 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 733 987 - -
Aed7g1716 992 MobiDBLite consensus disorder prediction 7 25 - -
Aed7g1716 992 Gene3D - 587 696 IPR023214 -
Aed7g1716 992 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 11 128 - -
Aed7g1716 992 CDD P-type_ATPase_APLT_Dnf-like 58 779 - -
Aed7g1716 992 SUPERFAMILY Calcium ATPase, transmembrane domain M 55 897 IPR023298 -
Aed7g1716 992 SUPERFAMILY HAD-like 311 733 IPR036412 -
Aed7g1716 992 Pfam Cation transport ATPase (P-type) 411 507 - -
Aed7g1716 992 ProSitePatterns E1-E2 ATPases phosphorylation site. 318 324 IPR018303 -
Aed7g1716 992 Gene3D - 324 586 IPR023299 GO:0000166
Aed7g1716 992 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 322 596 IPR023299 GO:0000166
Aed7g1716 992 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 129 153 - -
Aed7g1716 992 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 153 735 - -
Aed7g1716 992 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 154 733 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Aed7g1716 992 Pfam Phospholipid-translocating ATPase N-terminal 43 107 IPR032631 -
Aed7g1716 992 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 733 987 - -
Aed7g1716 992 MobiDBLite consensus disorder prediction 1 27 - -
Aed7g1716 992 Coils Coil 559 579 - -
Aed7g1716 992 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 11 128 - -
Aed7g1716 992 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 129 153 - -
Aed7g1716 992 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 153 735 - -
Aed7g1716 992 Pfam Phospholipid-translocating P-type ATPase C-terminal 733 897 IPR032630 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1716 Aed-Chr7 20561788 20582269 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1716 733 984 Primary Pumps ATPases AT1G59820 70.238 1.42e-122 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1716 K14802 - gmx:100815547 1115.91