Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1713 ATGATGTCGTACCAGTCGCCGGAAAGTGACGTCATAGCACCAACTCCTGGAGCGTTCAGGCTCCGGTGGGACGTGTTCCTGAGCTTCAGGGGTGCCGACACGCGCGGCGCCATCACGAAAGGGCTCTACAAGTCTCTGCAGGCACGTGGGGTTCGCGTGTTTCTGGACGACGACGGATTGGAGCGTGGGGAAGAGATAGCACGGGGGCTGATGGAGGGCATTGATGACTCAGCAGCGTTCATTGTCATCATATCTCAAAACTATGCTACTTCTCATTGGTGTCTCGAAGAACTCACCAAGATTTGCGACACCCAGAGGCTGGTCTTGCCCGTTTTCTACCGGGTCGACCCGTCGCAGGTCCGACACCAAACGGGTCCCTTCGAGGCGGGTTTCGCATCGCATGTACGAAGGTTTGGAGAAAATAAGGTTTCCAAGTGGAGGAATGCTTTGAAGACAGTTGGTGGACTTGCTGGTTGGGTTTTGAATAACAGTGAGGAAGATGATCTGATTCGACGTTTGGTGCAAAGGGTGATGAAGGAGTTGAGTAATACTCCCTTGGGTGTGCCTGAGTTTGCAATAGGGCTTGATAAACGTGTTGAGAAGGTGATGGAAGTGTTGCAAGTTCAATCCAATGGTGTCAAGGTTCTGGGGTTGTATGGTATGGGTGGGGTTGGTAAGACAACCCTAGCCAAGGCACTTTTCAATGCCCTTGTTAATCGTTTTACGCACCGTTGCTTCATTTCCAATGGGAGTAGAAATATTCAAGGAATTGTGCTAGATTTTGAAGAAGAAAGATTTTATAAAGGCAAGGCCAAATCAACTTTTTCCACAAACCTTCAATTGAGATCAAGTTTAAGAAATGTATCAGGACATATGAAACAACGCCTTAAGAATTATCTCCACCCTCATTCTCAAGCAGAGGAAAACGAAGAGGTTATAGTACTTCATACGAAGTCCTTTGAACCAATGGATAACCTGAGAAAGCTTCAGATCAATAATCTGAAATTGAAAGGAACGTTTCTTCCTGATGAATTGAAGTGGCTACAATGGCGAGGATGCCCTTTAGAACGTATGCCTTTGAAATCTTGGCCACGGGAGCTGGCTGTCCTTGATCTCAAAAACAGCAAGAAAATGGAAACCTTGTGGGGTTGGAATGGTTACAAGGTGCCACAGAACTTAATGTTTTTGAACCTCTCCCACTGCTTCCAACTCACTGCTATCCCTGATTTATCCGGGTGTCAGCATCTCGAGAAGATTGATCTGGAGAACTGCATTAGTCTAACTAAGATCCATGAATCAATTGGCAGTTTGAGTACCTTGCGTAGTTTAAATCTGACGCGTTGTTCAAGTCTTATCAACCTTCCCATTGATGTCTCAGGGCTAAAACATCTAGAGAGCCTTTTTCTTTCTGGCTGCACCAAGTTAAAAGTGTTACCACTAAGCATAGGCAGCCTGAAATCCTTGAAAACACTTGCTGCTAATGACACAGCTATAGCAGAGTTGCCACAGTCCATTTTTCGCCTCACCAAACTCGAACGCCTTGTTTTAGAACGTTGTCAACGTTTGAGAAGGCTTCCTAGTTGTATAGGACATCTATGTTCTTTGCAAGAGTTATCTCTACATATGTCTGGGTTAGAAGAATTACCTGATTCTGTTGGATCATTGAATAACCTTGAGAGACTGAATTTGACGTGGTGTGAATCTCTCACTGTGATTCCTGATTCTATAGGCAATCTCATATCCTTAACAGAACTTTACTTTAGTAGCACTGCAATTGAAGAACTCCCTTCTACCATTGGTTCTTTATCTTACTTGAGGGAGTTATCAGTTGGAAACTGTAAATTTCTCAGTGAATTGCCAAATTCACTCACATCTTTGGCCTCACTTGTTGATCTTACGTTAGATGGAACAACCATCACAAATTTGCCTGATGAGATTGGAGAGATGAAACTATTGAGGAAACTTGAGATGATGAATTGCAAAAATCTTGAATATTTACCAGAATCTATTGGCCAACTAGCATCTCTTACTACACTGAACATGGTCAATGGAAATATCAGGGAATTGCCAGACTCCATTGGAATGCTAGAAAATCTTGTCAACTTAAGATTGAACAAATGTAAAATGCTCAGAATGCTTCCAGCTTCTATTGGAAATTTGAATTCTCTATATCACTTTTTCATGGAGGAAACGACTCTCTCAAGCTTACCTGAAAGCTTTGGGATGCTCTCAAGCTTGAGAACATTGAGAATGGGAAAGAGGCCTGAATTAGATCCTAATGAAAATAACTTCCATTCAGAACCTAAAGAGAACGAAAGCCCTTTTGTATTAACATCTTCCTTCTGCAATCTGACTTTGCTATTTGAGCTTGATGCCCGAGCCTGGAGAATATCTGGGAAAGTTCCTGATGAATTTGAGAAGTTGTCACAATTAGAGACTTTAAGTTTGGGCTTGAATGATTTTCACAGCCTTCCTTCAAGCTTGAAGGGTCTTTCTATTCTAAAGGTGCTTTCACTTCCAAACTGCACTCAGCTGATTTCTCTTCCCTCACTTCCTTCAAGCTTGATTGAGCTGAATGTTGAAAACTGTTATGCACTAGAAACTATACATGACATGTCAAATTTAGAGAGCCTGAAGGAGTTGAAACTCACAAACTGTGCAAAGGTGGTGGATATTCCTGGTCTTGAAGGCTTGAAGTCCTTGAGAAGGTTGTACCTGAATGGTTGCGTTGCATGCTCCTCACAAATACGCACGAGACTTTCAAAGGTTGCATTGAGGAATTTACAGACATTGAGCATGCCAGGAGGAAAATTACCTGAATGGCTTTCAAAACAAACTGTGAGCTATTCCAAGCCTAAAAATCTTGAGCTAAAAGGTGTAATTGTTGGTGTTATTCTTTCAATCAACAATAACACTGATAAGTCTGAAGTGGTTGATGTTGTGGCAAAAGTTAGCAAAGAGGGCAGACATCTCTTTGGTACTGCATTAAACATCCGTGGGATGCCAAGGACAGATGAAGAACACATACACTTGTGTAGGTTCCATGATTACCATCAGTTGATAGCCTTTTTGAAAGATGGTGATGAAATTTGTGTGAGCAAGAGAAATCCACCTCTTGATGAGGGGTTGGACTTTGAGTTGAGAAAATGTGGGGTTCATTTAATCTTTGAAGGGGATGATGATTATGATGGAGATGAAGAATCGTTGGATAAAGGCCTACAATATGTCTCAGAAAAATTGGCCAGTTTTTTCAACACTTATGAAACTGGTGGTCCTATCTAG 3282 0.4235 MMSYQSPESDVIAPTPGAFRLRWDVFLSFRGADTRGAITKGLYKSLQARGVRVFLDDDGLERGEEIARGLMEGIDDSAAFIVIISQNYATSHWCLEELTKICDTQRLVLPVFYRVDPSQVRHQTGPFEAGFASHVRRFGENKVSKWRNALKTVGGLAGWVLNNSEEDDLIRRLVQRVMKELSNTPLGVPEFAIGLDKRVEKVMEVLQVQSNGVKVLGLYGMGGVGKTTLAKALFNALVNRFTHRCFISNGSRNIQGIVLDFEEERFYKGKAKSTFSTNLQLRSSLRNVSGHMKQRLKNYLHPHSQAEENEEVIVLHTKSFEPMDNLRKLQINNLKLKGTFLPDELKWLQWRGCPLERMPLKSWPRELAVLDLKNSKKMETLWGWNGYKVPQNLMFLNLSHCFQLTAIPDLSGCQHLEKIDLENCISLTKIHESIGSLSTLRSLNLTRCSSLINLPIDVSGLKHLESLFLSGCTKLKVLPLSIGSLKSLKTLAANDTAIAELPQSIFRLTKLERLVLERCQRLRRLPSCIGHLCSLQELSLHMSGLEELPDSVGSLNNLERLNLTWCESLTVIPDSIGNLISLTELYFSSTAIEELPSTIGSLSYLRELSVGNCKFLSELPNSLTSLASLVDLTLDGTTITNLPDEIGEMKLLRKLEMMNCKNLEYLPESIGQLASLTTLNMVNGNIRELPDSIGMLENLVNLRLNKCKMLRMLPASIGNLNSLYHFFMEETTLSSLPESFGMLSSLRTLRMGKRPELDPNENNFHSEPKENESPFVLTSSFCNLTLLFELDARAWRISGKVPDEFEKLSQLETLSLGLNDFHSLPSSLKGLSILKVLSLPNCTQLISLPSLPSSLIELNVENCYALETIHDMSNLESLKELKLTNCAKVVDIPGLEGLKSLRRLYLNGCVACSSQIRTRLSKVALRNLQTLSMPGGKLPEWLSKQTVSYSKPKNLELKGVIVGVILSINNNTDKSEVVDVVAKVSKEGRHLFGTALNIRGMPRTDEEHIHLCRFHDYHQLIAFLKDGDEICVSKRNPPLDEGLDFELRKCGVHLIFEGDDDYDGDEESLDKGLQYVSEKLASFFNTYETGGPI 1093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1713 1093 Gene3D - 21 179 IPR035897 -
Aed7g1713 1093 SMART LRR_typ_2 485 508 IPR003591 -
Aed7g1713 1093 SMART LRR_typ_2 808 830 IPR003591 -
Aed7g1713 1093 SMART LRR_typ_2 673 696 IPR003591 -
Aed7g1713 1093 SMART LRR_typ_2 626 649 IPR003591 -
Aed7g1713 1093 SMART LRR_typ_2 532 555 IPR003591 -
Aed7g1713 1093 SMART LRR_typ_2 579 602 IPR003591 -
Aed7g1713 1093 Gene3D - 180 310 IPR027417 -
Aed7g1713 1093 SUPERFAMILY L domain-like 315 643 - -
Aed7g1713 1093 PRINTS Disease resistance protein signature 435 451 - -
Aed7g1713 1093 PRINTS Disease resistance protein signature 215 230 - -
Aed7g1713 1093 SUPERFAMILY L domain-like 617 937 - -
Aed7g1713 1093 Gene3D Ribonuclease Inhibitor 635 971 IPR032675 -
Aed7g1713 1093 SMART till_3 22 156 IPR000157 GO:0007165
Aed7g1713 1093 Gene3D Ribonuclease Inhibitor 311 476 IPR032675 -
Aed7g1713 1093 Pfam TIR domain 23 184 IPR000157 GO:0007165
Aed7g1713 1093 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 249 IPR044974 GO:0006952
Aed7g1713 1093 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 273 1042 IPR044974 GO:0006952
Aed7g1713 1093 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 297 IPR027417 -
Aed7g1713 1093 SMART LRR_CC_2 555 582 IPR006553 -
Aed7g1713 1093 SMART LRR_CC_2 602 629 IPR006553 -
Aed7g1713 1093 SMART LRR_CC_2 649 676 IPR006553 -
Aed7g1713 1093 SMART LRR_CC_2 413 440 IPR006553 -
Aed7g1713 1093 Gene3D Ribonuclease Inhibitor 477 634 IPR032675 -
Aed7g1713 1093 CDD AAA 218 272 - -
Aed7g1713 1093 SUPERFAMILY Toll/Interleukin receptor TIR domain 20 159 IPR035897 -
Aed7g1713 1093 PANTHER TMV RESISTANCE PROTEIN N-LIKE 20 249 - -
Aed7g1713 1093 PANTHER TMV RESISTANCE PROTEIN N-LIKE 273 1042 - -
Aed7g1713 1093 Pfam NB-ARC domain 196 249 IPR002182 GO:0043531
Aed7g1713 1093 ProSiteProfiles TIR domain profile. 21 181 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1713 Aed-Chr7 20541378 20550001 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1713 554 723 WRKY Transcription Factor Family AT4G12020 31.977 1.25e-07 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1713 - - ccaj:109813420 1320.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g1713 7 20541378 20550001 Aed11g0271 11 2261308 2266758 PCT