Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1712 ATGCCGTCTCACGGGGATCTGGAGCGTCAGATCGAGCAGCTGATGGAGTGCAAGCCGCTGTCGGAGTCGGAGGTGAAGGCGCTGTGCGATCAAGCGAGGGCGATTCTGGTGGAGGAGTGGAACGTGCAACCGGTGAAGTGCCCCGTTACCGTCTGCGGCGATATTCACGGCCAGTTCTACGATCTCATCGAGTTGTTTCGGATTGGAGGGAACGCGCCCGATACCAATTATCTCTTCATGGGTGATTATGTAGATCGTGGATACTATTCAGTGGAGACTGTTACACTTTTGGTGGCTTTGAAAGTCCGTTACAGAGATAGAATCACAATTCTCAGGGGAAATCATGAAAGCCGTCAAATTACTCAAGTGTATGAACCATTTCTTCTCATTCAATACTTGTTTGATTATTTACCTCTGACTGCCCTCATTGAGAGTCAGATTTTCTGCTTGCATGGAGGTCTCTCACCTTCTTTGGATACACTGGATAACATCAGAGCATTGGATCGTATACAAGAGGAAAAGAATGTGGTGACTGTATTTAGTGCTCCAAATTACTGTTACCGATGCGGGAATATGGCTGCCATACTAGAAATAGGAGAGAATATGGATCAGAATTTTCTTCAGTTTGATCCAGCTCCCAGGCAAATTGAGCCTGACACCACACGCAAGACTCCAGATTATTTTTTGTAA 690 0.4638 MPSHGDLERQIEQLMECKPLSESEVKALCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYEPFLLIQYLFDYLPLTALIESQIFCLHGGLSPSLDTLDNIRALDRIQEEKNVVTVFSAPNYCYRCGNMAAILEIGENMDQNFLQFDPAPRQIEPDTTRKTPDYFL 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1712 229 PRINTS Serine/threonine phosphatase family signature 48 75 IPR006186 GO:0016787
Aed7g1712 229 PRINTS Serine/threonine phosphatase family signature 77 104 IPR006186 GO:0016787
Aed7g1712 229 PRINTS Serine/threonine phosphatase family signature 110 134 IPR006186 GO:0016787
Aed7g1712 229 Pfam Calcineurin-like phosphoesterase 48 174 IPR004843 GO:0016787
Aed7g1712 229 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 173 229 - -
Aed7g1712 229 SUPERFAMILY Metallo-dependent phosphatases 6 216 IPR029052 -
Aed7g1712 229 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 172 - -
Aed7g1712 229 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 173 229 - -
Aed7g1712 229 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 1 172 - -
Aed7g1712 229 ProSitePatterns Serine/threonine specific protein phosphatases signature. 111 116 IPR006186 GO:0016787
Aed7g1712 229 Gene3D - 2 229 IPR029052 -
Aed7g1712 229 SMART pp2a_7 20 213 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1712 Aed-Chr7 20536304 20540978 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1712 49 154 Calmodulin-binding Proteins AT5G63870 40.164 8.94e-21 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1712 K04382 - thj:104808798 371.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0269 11 2237491 2242464 Aed7g1712 7 20536304 20540978 PCT