Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1710 ATGTGTTCCGCAGAGAAGGACGGGATCATGCTCTTCGGCGTGCGCCTCACCGTAGCAGATAACAACCACCCCACTACTTCTTTCAGGAAGAGCGCCAGCATGAACAATCTCTCCCACTACGCCTCTCCACCACCGCACGATCCCATTCACAACTCAGGCTACGCCTCAGACGACGTCGTTCACCCCTCCCTTCGCACGCGCCACCGCAAGCGAGGAGTTCCGTGGACGGAGGAGGAGCACAGGTTATTCCTGTTGGGACTACAGAACGTCGGGAAAGGAGATTGGAGAGGAATTTCTAGAAACTTCGTCAAGACTCGAACTCCCACACAGGTTGCCAGTCATGCTCAAAAGTACTTCCTCCGCCGTCACACTCACAACCGCCGCCGCCGGAGATCTAGTCTCTTCGACATCACCACCACCCACACAGTGATGGACTCGTGGGCGGAGAAGGAAGAGGAGCAAGCGGTGCAGTGGACAACTACGTCGAAACCGGTTCTGCCGGTGGCTCCATCTTCGAAGATGGCCGAGTTGAACTTGAATGGAAAGTCACTGTCGCTGAAGCTTCCGGTATCCAAGGCACCACCTATGTCTAATGAGAATTTTGGCAGTGGCGGCGGGGAGGGCATTATCAGTGTTGCTTGA 642 0.5561 MCSAEKDGIMLFGVRLTVADNNHPTTSFRKSASMNNLSHYASPPPHDPIHNSGYASDDVVHPSLRTRHRKRGVPWTEEEHRLFLLGLQNVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRHTHNRRRRRSSLFDITTTHTVMDSWAEKEEEQAVQWTTTSKPVLPVAPSSKMAELNLNGKSLSLKLPVSKAPPMSNENFGSGGGEGIISVA 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1710 213 CDD SANT 74 119 IPR001005 -
Aed7g1710 213 ProSiteProfiles Myb-like domain profile. 67 119 IPR001005 -
Aed7g1710 213 PANTHER TRANSCRIPTION FACTOR KUA1 3 160 - -
Aed7g1710 213 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 70 121 IPR006447 GO:0003677
Aed7g1710 213 Pfam Myb-like DNA-binding domain 74 119 IPR001005 -
Aed7g1710 213 Gene3D - 73 124 - -
Aed7g1710 213 ProSiteProfiles SANT domain profile. 70 123 IPR017884 -
Aed7g1710 213 PANTHER OS01G0187900 PROTEIN 3 160 - -
Aed7g1710 213 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 123 IPR017930 -
Aed7g1710 213 MobiDBLite consensus disorder prediction 192 213 - -
Aed7g1710 213 SMART sant 71 121 IPR001005 -
Aed7g1710 213 SUPERFAMILY Homeodomain-like 68 122 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1710 Aed-Chr7 20519586 20521815 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed7g1710 Myb_DNA-binding 1.7e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1710 - - gmx:778091 295.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0267 11 2215330 2217721 Aed7g1710 7 20519586 20521815 PCT