Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1705 ATGGGGCTGAAGGGTAGGTGGTTGGGTAGTTCAAGTTGGCAAAGACATTTGTTCAATTGGGAGGAGGAGATGGGAGTCCAATATTTTGGACAATATATGGAGAACTCGTATGCAATTTTTCAATATCAAATAATGAGTAGAGGTGGTCAACAATTGACTATAATAGATGCCAGACAGTATATCAAGGAAGTAAAACAGACATTTCAAGACAAAAGCGAAAAGTTTGACAATTTTTTGGATGTAATGAAAGATTACAAAATTCATAGGTTTGATAAAGTTGAACCACATTCTTCCCTTCAATTCCCCACATATTATATATATGCATTCCCTCAATTAATGTTAGGGGATTTTTTAGCAAAAATGGAGGAGATTCTTAAAGACCATGAGGATTTGATTGTGGGATTTAACAAGTTTTTGCCAAAGAGGTATGAAATTGAGGATGAAATCCAGTTTAAAGATGTTGCGAAATATGTGGACAAGATTAAAGTGACAAAATTGTTAAATTTAAGTATCTCATATGACATAACATGGGATTTTATGGTTGATTTTTGTGTGGCATAA 561 0.3369 MGLKGRWLGSSSWQRHLFNWEEEMGVQYFGQYMENSYAIFQYQIMSRGGQQLTIIDARQYIKEVKQTFQDKSEKFDNFLDVMKDYKIHRFDKVEPHSSLQFPTYYIYAFPQLMLGDFLAKMEEILKDHEDLIVGFNKFLPKRYEIEDEIQFKDVAKYVDKIKVTKLLNLSISYDITWDFMVDFCVA 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1705 186 PANTHER SIN3B-RELATED 44 164 IPR039774 GO:0003714
Aed7g1705 186 Gene3D Paired amphipathic helix 47 141 IPR036600 GO:0006355
Aed7g1705 186 SUPERFAMILY PAH2 domain 50 141 IPR036600 GO:0006355
Aed7g1705 186 Pfam Paired amphipathic helix repeat 73 139 IPR003822 GO:0006355
Aed7g1705 186 ProSiteProfiles PAH domain profile. 50 142 IPR003822 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1705 Aed-Chr7 20470221 20472852 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1705 52 145 WRKY Transcription Factor Family AT4G12020 32.979 8.89e-10 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aed7g1705 PAH 9.2e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1705 K11644 - ccaj:109792823 92.4337