Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1681 ATGGCGCATCAAGGAGAACCGGCGAAGCTGCGGTGGGGAGAGCTGGAGGAGGACGACGGCGAGGATCTAGACTTCCTCCTGCCGCCACGGCAGATCATAGGCCCCGACGAGAACGGGATTAAGAGGGTGATCGAGTACAAGTTCGACGAGGACGGAAACAAGGTCAAGATCACAACCACCACGCGCACGCGCAAGCTCGCCAACGCGCGTCTCAGCAAACGCGCCGTCGAGCGCCGCTCATGGCCCAAGTTCGGCGACGCCGTCCATGAAGACGTCGGCGCGCGTCTCACCATGGTCTCAACTGAAGAGATCCTCCTCGAACGCCCCAAGCCTCTTGGGAATCTAGGTGCTAAAGCGGAGGAGCCGAAGAATGCTGGAGACCCATTGGCTCAATTTCAGAAAGGTGCTGTTCTCATGGTCTGTAGGACTTGTGGGAAGAAGGGTGATCACTGGACCTCAAGGTGTCCATACAAGGATCTTGCCCCGCCATCCGAGGGATTCACTGATAAACCTCCAACGGCAGATGCTGCGGGGGCCACTGCTGGTGGTGCAGCCAAGGGAGCATACGTGCCTCCTGGCTTGAGGGCAGGTGCTGAGAGGACTACCGGATCTGATATGCGACGCAGGAACGATGAGAACTCTGTGAGGGTAACCAACCTCTCTGAGGACACAAGAGAGCCTGATTTGCTGGAGCTGTTCCGTCCTTTTGGTCCCGTCAGCAGAGTCTATGTTGCCATTGATCAGAAGACCAGCATGAGCAGAGGCTTTGGCTTTGTTAACTTTGTCAACAGGGAAGATGCACAAAGAGCTATCAACAAACTCAATGGGTATGGCTATGACAATCTCATCCTTAGAGTTGAATGGGCAACCCCAAGGGCAACCTAA 885 0.5582 MAHQGEPAKLRWGELEEDDGEDLDFLLPPRQIIGPDENGIKRVIEYKFDEDGNKVKITTTTRTRKLANARLSKRAVERRSWPKFGDAVHEDVGARLTMVSTEEILLERPKPLGNLGAKAEEPKNAGDPLAQFQKGAVLMVCRTCGKKGDHWTSRCPYKDLAPPSEGFTDKPPTADAAGATAGGAAKGAYVPPGLRAGAERTTGSDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGPVSRVYVAIDQKTSMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAT 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1681 294 Hamap Eukaryotic translation initiation factor 3 subunit G [EIF3G]. 9 293 IPR017334 GO:0003743|GO:0005737|GO:0005852
Aed7g1681 294 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 213 291 IPR000504 GO:0003723
Aed7g1681 294 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 7 293 - -
Aed7g1681 294 MobiDBLite consensus disorder prediction 163 214 - -
Aed7g1681 294 Gene3D - 188 294 IPR012677 -
Aed7g1681 294 PIRSF Transl_init_eIF-3_RNA-bind 1 294 IPR017334 GO:0003743|GO:0005737|GO:0005852
Aed7g1681 294 CDD RRM_eIF3G_like 214 289 IPR034240 -
Aed7g1681 294 SMART rrm1_1 214 287 IPR000504 GO:0003723
Aed7g1681 294 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 7 293 - -
Aed7g1681 294 Pfam Eukaryotic translation initiation factor 3 subunit G 32 160 IPR024675 -
Aed7g1681 294 SUPERFAMILY RNA-binding domain, RBD 202 292 IPR035979 GO:0003676
Aed7g1681 294 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 215 281 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1681 Aed-Chr7 20155233 20157401 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1681 4 294 Eukaryotic Initiation Factors Gene Family AT3G11400 67.610 8.17e-152 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1681 K03248 - gmx:100818725 533.102