Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1675 ATGAATTTTAGTTGGGCTTGGGCAGTGGACAATGATATAAGGAGTGAGACTGCATCAAATTCGGGAGCATCTCCTCTCCCTAGTTATGGTTCGGTAGTGAACTGTTTCATAAGGAGTGGGACTGTGTCCAATTTCGGAACATCCCCTGCCCATAGTTTAGCTTCGGAAGAAGACAATGCGATGAGGAGCAACAGTCCTGCTAGTGGAACATCCTCTGATGTCACGGCGGGATATGTTGTCGAAGGTTTACAGTTATTCAGCCCAGCTGAGCTTATAGCCGCCACCAACAATTTCTCACTCGACAACAAGATTGGTGCTGGGAGCTTTGGTGTTGTGTATAGAGGCAAACTCGTCGATGGCAGTGAGGTCGCAATCAAGAGGGGTGAAACCTGGCCCAAGGAAAACAACGTATTTCACTCTAAACTGCTCCCCTTGTCCCGTTTACACCACAGCAACTTGGTCCGGCTGGTTGGATTATGTGAAAAGAAATACGAAAGACTATTGGTGTACGAGTACATGAAGAATGGGTCGTTGTATGATGGTTTGCATGACAAGAACAACGTGGAGAAGGGTAGAAGTGTGTTGAATTCGTGGAAAATGAGGATCAAAATTGCTTTGGATGCTTCCCGAGGATTACAATATCTTCATAAGTATGCAGCCTCATCAATTACCCGCAGAGATATCAAGTCTTCCAACATTCTTCTTGATGCTACTTGGACTGCAAGAGTATCTTTGTTGAGTCCAGAACCTGACCATGACCACCAACCACTGAAGACAGCAAGAAAGAGTGATGATGTGTATGGTCTTGGAGTTGTACTGCTAGAGCTTTTAACGGGAAAGAGACCTATATTCTTGTACTGGGAAAAGGGAGGCACACTATTAAGTGTGCACCATCTGGTTGACTTTGCAGTGCCTGCTATTTTGGCCGGAGATTTGGTGAAAATTTTGGACTCAAGGGTTGGACCACCGGATGTGAATGAAGCAGAGGCAGTGGATATAGTTGGCAATACCGCTATGCATTGTGTGAATTTGGAAGGGAAAGATAGAACAACCGTGACTGAGATTGTGGTCAATTTGGAGAGGGCTTTGGCTATTTGTGATTGTAGCCCCCATGATATCATTTACAGTGGCAATATCTATGATGTTTCAGTAAGAAAAGCTGTTCTGCAACATTGCTTACGTGCGTTGTATAACTCCAATTAA 1203 0.4464 MNFSWAWAVDNDIRSETASNSGASPLPSYGSVVNCFIRSGTVSNFGTSPAHSLASEEDNAMRSNSPASGTSSDVTAGYVVEGLQLFSPAELIAATNNFSLDNKIGAGSFGVVYRGKLVDGSEVAIKRGETWPKENNVFHSKLLPLSRLHHSNLVRLVGLCEKKYERLLVYEYMKNGSLYDGLHDKNNVEKGRSVLNSWKMRIKIALDASRGLQYLHKYAASSITRRDIKSSNILLDATWTARVSLLSPEPDHDHQPLKTARKSDDVYGLGVVLLELLTGKRPIFLYWEKGGTLLSVHHLVDFAVPAILAGDLVKILDSRVGPPDVNEAEAVDIVGNTAMHCVNLEGKDRTTVTEIVVNLERALAICDCSPHDIIYSGNIYDVSVRKAVLQHCLRALYNSN 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1675 400 MobiDBLite consensus disorder prediction 48 72 - -
Aed7g1675 400 Pfam Protein tyrosine and serine/threonine kinase 99 244 IPR001245 GO:0004672|GO:0006468
Aed7g1675 400 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 84 371 - -
Aed7g1675 400 Gene3D Transferase(Phosphotransferase) domain 1 247 366 - -
Aed7g1675 400 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 84 371 IPR044815 GO:0004674
Aed7g1675 400 ProSitePatterns Protein kinases ATP-binding region signature. 104 126 IPR017441 GO:0005524
Aed7g1675 400 SUPERFAMILY Protein kinase-like (PK-like) 76 359 IPR011009 -
Aed7g1675 400 ProSiteProfiles Protein kinase domain profile. 98 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g1675 400 Gene3D Phosphorylase Kinase; domain 1 61 172 - -
Aed7g1675 400 SMART serkin_6 98 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g1675 400 Gene3D Transferase(Phosphotransferase) domain 1 173 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1675 Aed-Chr7 20086776 20087978 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1675 68 377 Receptor kinase-like Gene Family AT3G55950 55.491 2.74e-99 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Aed7g1675 PK_Tyr_Ser-Thr 7.5e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1675 - - gmx:100805573 393.66