Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1669 ATGACTGTGGATGAAGTCGGTAGTAGCTCCGAGTGGAGCATAGAACAGGATAAAGCATTTGAAAATGCCTTGGCAATTCATCCTGAGGATGCTTCAGACCGATGGGAGAAGATTGCGGCTGACGTACCAGGGAAGACCTTGGAAGAGATTAAACACCACTATGAGCTCTTGGTTGAAGATGTTAACCAGATTGAATCTGGTTGTGTGCCTTTACCATCTTATAATTCTTCCCCAGAGGGATCAACAAGCCATGCTAGTGATGAAGGAGCTGGCAAGAAGGGAGGCAACTCTTGGAATTGTAACAATGATGGAACTAAGGCTTCAAGATCAGATCAGGAACGACGAAAGGGTATTGCATGGACAGAGGATGAACACAGGTTATTCCTTCTTGGCTTGGAAAAGTATGGAAAAGGTGACTGGCGAAGTATATCAAGAAACTTTGTGGTGACAAGAACGCCTACACAAGTAGCAAGCCATGCCCAAAAATACTTCATTCGTTTGAACTCGATGAACAAAGACAGAAGGCGATCCAGCATACACGACATCACCAGTGTCAACAATGGAGATGTCTCAGCAGCTCAAGGACCAATTACTGGCCAGACAAATGGTTCTTCAGCGAATTCTGCTGGAAAATCAGCCAAACCAGCCCCTCCAACCACAACTGCTGCCCCAGGAGTAGGAATATATGCTGCTCCCACCATTGGACAACCTATAGGAGGACCCCTTGTATCTGCAGTTGGCACCCCAGTGATGAACCTTCCTCCCCCGGCACACATGGCATATGGTCTCAGAGCACCGGTTCCCGGGGCAGTTGTTCCTGGAGCACCAATGAGCTTAGGTCCTGTGCCATACCATATACCACACACATCTGCTCATAGATGA 882 0.4762 MTVDEVGSSSEWSIEQDKAFENALAIHPEDASDRWEKIAADVPGKTLEEIKHHYELLVEDVNQIESGCVPLPSYNSSPEGSTSHASDEGAGKKGGNSWNCNNDGTKASRSDQERRKGIAWTEDEHRLFLLGLEKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVNNGDVSAAQGPITGQTNGSSANSAGKSAKPAPPTTTAAPGVGIYAAPTIGQPIGGPLVSAVGTPVMNLPPPAHMAYGLRAPVPGAVVPGAPMSLGPVPYHIPHTSAHR 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1669 293 PANTHER HOMEODOMAIN-LIKE TRANSCRIPTIONAL REGULATOR-RELATED 7 281 - -
Aed7g1669 293 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 116 166 IPR006447 GO:0003677
Aed7g1669 293 CDD SANT 11 58 IPR001005 -
Aed7g1669 293 MobiDBLite consensus disorder prediction 186 215 - -
Aed7g1669 293 ProSiteProfiles Myb-like domain profile. 10 58 IPR001005 -
Aed7g1669 293 Gene3D - 4 71 - -
Aed7g1669 293 SMART sant 116 166 IPR001005 -
Aed7g1669 293 SMART sant 8 60 IPR001005 -
Aed7g1669 293 Pfam Myb-like DNA-binding domain 119 164 IPR001005 -
Aed7g1669 293 Pfam Myb-like DNA-binding domain 10 54 IPR001005 -
Aed7g1669 293 PANTHER TRANSCRIPTION FACTOR KUA1 7 281 - -
Aed7g1669 293 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 111 168 IPR017930 -
Aed7g1669 293 Gene3D - 118 170 - -
Aed7g1669 293 CDD SANT 119 164 IPR001005 -
Aed7g1669 293 MobiDBLite consensus disorder prediction 69 116 - -
Aed7g1669 293 MobiDBLite consensus disorder prediction 69 84 - -
Aed7g1669 293 ProSiteProfiles SANT domain profile. 120 168 IPR017884 -
Aed7g1669 293 SUPERFAMILY Homeodomain-like 10 66 IPR009057 -
Aed7g1669 293 MobiDBLite consensus disorder prediction 186 219 - -
Aed7g1669 293 SUPERFAMILY Homeodomain-like 114 169 IPR009057 -
Aed7g1669 293 ProSiteProfiles Myb-like domain profile. 112 164 IPR001005 -
Aed7g1669 293 ProSiteProfiles SANT domain profile. 7 62 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1669 Aed-Chr7 20021195 20028529 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aed7g1669 Myb_DNA-binding 2.1e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1669 - - gmx:100820272 516.538