Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1664 ATGAATTGGGTTCACTCTCAAATCTGCCATAGTAGCAGTGATGCTGCTATCATTATCAACAACCCCACCACTACTATTTCCCCATCTTCCTCTTGTTGTTCTTGTTCTTGTTCTTCTTACAGCTCTGAATACAAGAAACAACTAGCCCCTCCTCTAGCTTCTTCTTCTTCATCAGGCACCAGAATAAGCCCTGCACTTGTTTTCATCTTTGTAATTGTAGCAATTGTGTTCTTCATCTCTGGTCTCCTCCACCTGCTTGTTAGATTGTTCATAAGGCACAGGTCCACTTCATCATCATCATCATCACCATCAACAATTTCTCAGTCCAATAATAATAGGTACCACCTGCCTGATGAAATGTCTGAATCTGATGATCCTTACCAGAGGCAGCTGCAGCAGCTCTTCCACCTCCATGACTCAGGCCTGGATCAGGCCTTAATAGATGCCCTCCCAGTTTTCCTCTACAAAGACATAATAGGTTTGAAGGAGCCTTTTGACTGTGCAGTGTGCCTCTGCCAGTTCTCACAGCAAGACATGCTGAGGCTGCTTCCACTTTGCAACCATGCTTTCCACATTGATTGCATAGACACATGGCTCTTGTCTAACTCAACTTGTCCTCTCTGTAGAGGCAGTCTTTATGAGCCTGGCTTTTCCTTTGAGAATCCAGTTTATGACTTTGAGGGTGTGAGAGAGGAAGATGATGGGGTTTCAGCAGGAAGTGGTGCTGCTGCTGGTGAGGCTGGTTGTATCAACAACAACAATAACAAGCATGCAGAAAACCACATAATGAGTGGGAAAAGGGTGTTTTCTGTGAGGCTTGGGAAGTTTAGAAGCTCAAATAATGGGGAGGGGGTGGTGGAAAGAGGTGGTGGTGGTGGTGGTGGAGGTGAGAGTAGCACAAGTAATTTGGATGTTAGGAGATGCTACTCAATGGGGTCTTTTCAGTATGTGGTTGCTGATTCAGATTTGCAAGTGGCTTTATGCCCCAATAGAGGTGGTGGTGGGAGTATGAGACAATTGAAAGGGAGATTAGGCCATTATGGTAATTCTTCCACTGATGGGGGTGATGCTGAGGGGAAAAAACTCAACATTGCTAGGAAAGGTGAAAGCTTTTCTGTTTCCAAGATCTGGCAATGGTCTAAGAAGGACAAGGTCTCAAGTTCACAAGAAAACAACCATTTGGGTGGTTCTAATACCACTGCTGCTTTGCCATGGATGAATAGAGCTCAAGGTACATGA 1239 0.4487 MNWVHSQICHSSSDAAIIINNPTTTISPSSSCCSCSCSSYSSEYKKQLAPPLASSSSSGTRISPALVFIFVIVAIVFFISGLLHLLVRLFIRHRSTSSSSSSPSTISQSNNNRYHLPDEMSESDDPYQRQLQQLFHLHDSGLDQALIDALPVFLYKDIIGLKEPFDCAVCLCQFSQQDMLRLLPLCNHAFHIDCIDTWLLSNSTCPLCRGSLYEPGFSFENPVYDFEGVREEDDGVSAGSGAAAGEAGCINNNNNKHAENHIMSGKRVFSVRLGKFRSSNNGEGVVERGGGGGGGGESSTSNLDVRRCYSMGSFQYVVADSDLQVALCPNRGGGGSMRQLKGRLGHYGNSSTDGGDAEGKKLNIARKGESFSVSKIWQWSKKDKVSSSQENNHLGGSNTTAALPWMNRAQGT 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1664 412 MobiDBLite consensus disorder prediction 96 123 - -
Aed7g1664 412 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 2 400 - -
Aed7g1664 412 CDD RING-H2_PA-TM-RING 166 209 - -
Aed7g1664 412 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 2 400 - -
Aed7g1664 412 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 142 215 IPR013083 -
Aed7g1664 412 Pfam Ring finger domain 166 209 IPR001841 -
Aed7g1664 412 MobiDBLite consensus disorder prediction 384 412 - -
Aed7g1664 412 SUPERFAMILY RING/U-box 146 215 - -
Aed7g1664 412 MobiDBLite consensus disorder prediction 280 302 - -
Aed7g1664 412 MobiDBLite consensus disorder prediction 96 116 - -
Aed7g1664 412 ProSiteProfiles Zinc finger RING-type profile. 167 209 IPR001841 -
Aed7g1664 412 SMART ring_2 167 208 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1664 Aed-Chr7 19960848 19962086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1664 81 384 C3H Transcription Factor Family AT2G18650 36.503 3.81e-53 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1664 - - gmx:100779678 566.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g1664 7 19960848 19962086 Aed7g1664 7 19960848 19962086 ECH