Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1653 ATGGCTTCTTCACTCAGAATCTCAAGACTCATCTCTCGCTCCTTTTCTTCTACCTCCATCTTTTCACGAGGTGGGAATGGTTACCTTGGTTCAAGACACTGTAAATACAGCACTGCTGCTGCCATTGAAGAAGAACCCATTAAACCATCAGTACAAGTAGAACACACCCAACTCTTGATTAATGGAAAATTCGTAGATGCTGCTTCTGCAAAAAGATGGAATAACAAAAGAAAGAAAAAAGAGGGATTTTTTTTTATGGGTTTCATTTTTCTGGGTATCTTAATTACTATTGGGATTCTTGTGGAAAGGCAAAGGACCTTGTTGCGCGTAGCTGATCTGATTGAGAAGCATAATGATGAGCTTGCAGCACTTGAGACTTGGGATAATGGAAAGCCTTATGAACAAGCTGCTAAGATTGAAGTTCCAATGGTTGTTCGCCTGATTCGATACTATGCTGGTTGGGCGGATAAGATTCATGGTCTAACCGTTCAGGCTGATGGACCATATCATGTGCACACATTGCATGAACCCATTGGTGTTGCTGGTCAGATCATTCCTTGGAACTTCCCTCTTCTCATGTTTGCCTGGAAGGCTGGACTTCCTGCTGGTGTTTTAAATGTAGTATCAGGCTTTGGTCCAACTGCTGGTGCTGCTCTTGCTAGTCACATGGAGGTTGATAAGCTTGCTTTTACTGGTTCCACTGATACTGGGAAAGTTGTCCTTGAACTGGCAGCTAAAAGTAATCTTAAGCCTGTTACTTTGGAGCTTGGTGGGAAATCTCCCTTTATTGTGTGTGAAGATGCTGATGTAGATCAAGCTGTTGAGCTAGCACACTTTGCTTTATTCTTTAATCAGGGACAATGTTGCTGTGCCGGGTCTCGAACATTTGTACATGAAAGTGTATATGATGAGTTTGTTGAGAAAGCAAAGGCTCGCGCTTTGAAACGTGTTGTTGGTGATCCATTCAAGGGGGGAATAGAGCAAGGTCCTCAGATTGATTCAGATCAATTTGAGAAAATACTGAAGTACATCAGATCTGGTGTTGAAAATGGAGCTACCCTTGAAACCGGAGGAGACAGGCTAGGCAACAAGGGCTTCTACATTCAACCTACTGTCTTCTCAAATGTTAAGGATGGCATGCTGATTGCAAAGGATGAGATCTTTGGTCCAGTCCAATCCATATTAAAATTCAAGGACCTTGGTGAGGTAGTTCAAAGAGCGAACAACACACGTTACGGGCTAGCAGCAGGAGTGTTCACAAAGAACATAGACACCGCCAACACTTTGACACGGGCGCTGAGAGTTGGAACAGTGTGGATAAACTGCTTTGACACATTTGATGCTGCAATTCCCTTTGGAGGGTACAAGATGAGTGGCCAAGGCAGAGAAAAAGGAGAGTACAGCCTCAAGAACTACTTGCAAGTGAAGGCTGTTATTAATCCCTTGAAGAACCCTGCATGGCTTTAA 1467 0.4335 MASSLRISRLISRSFSSTSIFSRGGNGYLGSRHCKYSTAAAIEEEPIKPSVQVEHTQLLINGKFVDAASAKRWNNKRKKKEGFFFMGFIFLGILITIGILVERQRTLLRVADLIEKHNDELAALETWDNGKPYEQAAKIEVPMVVRLIRYYAGWADKIHGLTVQADGPYHVHTLHEPIGVAGQIIPWNFPLLMFAWKAGLPAGVLNVVSGFGPTAGAALASHMEVDKLAFTGSTDTGKVVLELAAKSNLKPVTLELGGKSPFIVCEDADVDQAVELAHFALFFNQGQCCCAGSRTFVHESVYDEFVEKAKARALKRVVGDPFKGGIEQGPQIDSDQFEKILKYIRSGVENGATLETGGDRLGNKGFYIQPTVFSNVKDGMLIAKDEIFGPVQSILKFKDLGEVVQRANNTRYGLAAGVFTKNIDTANTLTRALRVGTVWINCFDTFDAAIPFGGYKMSGQGREKGEYSLKNYLQVKAVINPLKNPAWL 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1653 488 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 101 199 - -
Aed7g1653 488 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 100 197 IPR016162 GO:0016491
Aed7g1653 488 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE 101 199 - -
Aed7g1653 488 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE 198 488 - -
Aed7g1653 488 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE 28 73 - -
Aed7g1653 488 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 198 488 - -
Aed7g1653 488 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 28 73 - -
Aed7g1653 488 Pfam Aldehyde dehydrogenase family 195 478 IPR015590 GO:0016491
Aed7g1653 488 SUPERFAMILY ALDH-like 101 481 IPR016161 GO:0016491
Aed7g1653 488 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 258 483 IPR016163 GO:0016620
Aed7g1653 488 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 254 261 IPR029510 GO:0016491
Aed7g1653 488 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 282 293 IPR016160 GO:0016491
Aed7g1653 488 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 198 257 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1653 Aed-Chr7 19815381 19819412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1653 6 488 Aldehyde Dehydrogenase Gene Family AT3G48000 65.858 0.0 705
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1653 K00128 - gmx:100777399 829.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g1653 7 19815381 19819412 Aed7g1653 7 19815381 19819412 ECH